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Platform GPL18044 Query DataSets for GPL18044
Status Public on Dec 10, 2013
Title Agilent-046064 Unrestricted_Human_miRNA_V19.0_Microarray (Feature Number version)
Technology type in situ oligonucleotide
Distribution commercial
Organism Homo sapiens
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description Human only V19.0 design.

Arrays of this design have barcodes that begin with 16046064 or 2546064.

Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.

The ID column represents the Agilent Feature Extraction feature number.

Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).

To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
 
Submission date Dec 10, 2013
Last update date Dec 13, 2017
Organization Agilent Technologies
E-mail(s) cag_sales-na@agilent.com
Phone 877-424-4536
URL http://www.agilent.com
Department
Street address
City Palo Alto
State/province CA
ZIP/Postal code 94304
Country USA
 
Samples (212) GSM1289383, GSM1289384, GSM1289385, GSM1289386, GSM1289387, GSM1289388 
Series (14)
GSE53325 Salivary microRNAs May Be A Valuable Biomarker To Detect Resectable Pancreatic Cancer
GSE57555 mRNA/microRNA expression profiles of HCC or CCC patients' liver, together with those of non-tumor part tissues
GSE63445 miRNA expression of extracellular vesicles
Relations
Alternative to GPL18402 (miRNA ID version)
Alternative to GPL23860 (miRBase release 21 miRNA ID version)

Data table header descriptions
ID Agilent feature number
COL Column
ROW Row
PROBE_NAME
CONTROL_TYPE Control type
miRNA_ID
GENE_NAME Gene Name
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
SPOT_ID Spot identifier

Data table
ID COL ROW PROBE_NAME CONTROL_TYPE miRNA_ID GENE_NAME ACCESSION_STRING CHROMOSOMAL_LOCATION SPOT_ID
1 192 328 miRNABrightCorner30 pos --pos
2 192 326 Blank pos --pos
3 192 324 Blank pos --pos
4 192 322 Blank pos --pos
5 192 320 Blank pos --pos
6 192 318 Blank pos --pos
7 192 316 Blank pos --pos
8 192 314 Blank pos --pos
9 192 312 Blank pos --pos
10 192 310 Blank pos --pos
11 192 308 A_25_P00015201 FALSE hsa-miR-1272 hsa-miR-1272 mir|hsa-miR-1272|mir|MIMAT0005925 chr15:65054630-65054614
12 192 306 A_25_P00010927 FALSE hsa-miR-215 hsa-miR-215 mir|hsa-miR-215|mir|MIMAT0000272 chr1:220291241-220291222
13 192 304 A_25_P00016223 FALSE hsa-miR-3651 hsa-miR-3651 mir|hsa-miR-3651|mir|MIMAT0018071 chr9:95054826-95054812
14 192 302 A_25_P00017417 FALSE hsa-miR-642b-5p hsa-miR-642b-5p mir|hsa-miR-642b-5p|mir|MIMAT0022736 chr19:46178220-46178204
15 192 300 A_25_P00017016 FALSE hsa-miR-4535 hsa-miR-4535 mir|hsa-miR-4535|mir|MIMAT0019075 chr22:49176148-49176159
16 192 298 A_25_P00012795 FALSE hsa-miR-616-3p hsa-miR-616-3p mir|hsa-miR-616-3p|mir|MIMAT0004805|mir|hsa-miR-616_v17.0|mir|MIMAT0004805 chr12:057913022-057913008,chr12:057913022-057913008
17 192 296 A_25_P00012525 FALSE hsa-miR-519e-3p hsa-miR-519e-3p mir|hsa-miR-519e-3p|mir|MIMAT0002829|mir|hsa-miR-519e_v17.0|mir|MIMAT0002829 chr19:054183245-054183266,chr19:054183245-054183266
18 192 294 A_25_P00017255 FALSE hsa-miR-499b-3p hsa-miR-499b-3p mir|hsa-miR-499b-3p|mir|MIMAT0019898|mir|hsa-miR-499a-3p_v17.0|mir|MIMAT0019898 chr20:033578269-033578253,chr20:033578269-033578253
19 192 292 A_25_P00010994 FALSE hsa-miR-645 hsa-miR-645 mir|hsa-miR-645|mir|MIMAT0003315 chr20:49202387-49202401
20 192 290 A_25_P00010561 FALSE hsa-miR-520e hsa-miR-520e mir|hsa-miR-520e|mir|MIMAT0002825 chr19:54179021-54179038

Total number of rows: 62976

Table truncated, full table size 8809 Kbytes.




Download family Format
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Supplementary data files not provided
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