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    ATXN2 ataxin 2 [ Papio anubis (olive baboon) ]

    Gene ID: 101001338, updated on 8-Mar-2024

    Summary

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    Gene symbol
    ATXN2
    Gene description
    ataxin 2
    See related
    Ensembl:ENSPANG00000017168
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Papio anubis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio
    Orthologs
    human mouse all
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    Genomic context

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    See ATXN2 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    104 current Panubis1.0 (GCF_008728515.1) 9 NC_044984.1 (105754424..105909952, complement)
    103 previous assembly Panu_3.0 (GCF_000264685.3) 11 NC_018162.2 (111206989..111366505, complement)

    Chromosome 9 - NC_044984.1Genomic Context describing neighboring genes Neighboring gene heat shock cognate 71 kDa protein pseudogene Neighboring gene PH domain containing endocytic trafficking adaptor 1 Neighboring gene SH2B adaptor protein 3 Neighboring gene U7 small nuclear RNA Neighboring gene interferon-induced transmembrane protein 3 pseudogene Neighboring gene 40S ribosomal protein S18-like Neighboring gene BRCA1 associated protein Neighboring gene acyl-CoA dehydrogenase family member 10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in stress granule assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic stress granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ataxin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Papio anubis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Panubis1.0 Primary Assembly

    Genomic

    1. NC_044984.1 Reference Panubis1.0 Primary Assembly

      Range
      105754424..105909952 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021922948.2 → XP_021778640.2  ataxin-2 isoform X18

      UniProtKB/TrEMBL
      A0A2I3N4C8
      Conserved Domains (5) summary
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam09770
      Location:902 → 1178
      PAT1; Topoisomerase II-associated protein PAT1
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    2. XM_021922950.2 → XP_021778642.2  ataxin-2 isoform X20

      Conserved Domains (5) summary
      PHA03247
      Location:787 → 1124
      PHA03247; large tegument protein UL36; Provisional
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam07145
      Location:768 → 783
      PAM2; Ataxin-2 C-terminal region
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    3. XM_021922947.2 → XP_021778639.2  ataxin-2 isoform X17

      UniProtKB/TrEMBL
      A0A096MU68
      Conserved Domains (4) summary
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam09770
      Location:832 → 1108
      PAT1; Topoisomerase II-associated protein PAT1
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    4. XM_021922945.2 → XP_021778637.2  ataxin-2 isoform X15

      UniProtKB/TrEMBL
      A0A096MU68
      Conserved Domains (4) summary
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam09770
      Location:841 → 1117
      PAT1; Topoisomerase II-associated protein PAT1
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    5. XM_021922946.2 → XP_021778638.2  ataxin-2 isoform X16

      UniProtKB/TrEMBL
      A0A096MU68
      Conserved Domains (4) summary
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam09770
      Location:836 → 1112
      PAT1; Topoisomerase II-associated protein PAT1
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    6. XM_021922943.2 → XP_021778635.2  ataxin-2 isoform X14

      UniProtKB/TrEMBL
      A0A2I3N4C8
      Related
      ENSPANP00000021053.2, ENSPANT00000055532.2
      Conserved Domains (6) summary
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam07145
      Location:904 → 919
      PAM2; Ataxin-2 C-terminal region
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam09770
      Location:924 → 1112
      PAT1; Topoisomerase II-associated protein PAT1
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    7. XM_021922939.2 → XP_021778631.2  ataxin-2 isoform X9

      UniProtKB/TrEMBL
      A0A096MU68
      Conserved Domains (7) summary
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam07145
      Location:904 → 919
      PAM2; Ataxin-2 C-terminal region
      pfam03154
      Location:916 → 1295
      Atrophin-1; Atrophin-1 family
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam09770
      Location:924 → 1112
      PAT1; Topoisomerase II-associated protein PAT1
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    8. XM_021922934.2 → XP_021778626.2  ataxin-2 isoform X4

      UniProtKB/TrEMBL
      A0A096MU68
      Related
      ENSPANP00000003365.3, ENSPANT00000011096.3
      Conserved Domains (6) summary
      PHA03247
      Location:923 → 1247
      PHA03247; large tegument protein UL36; Provisional
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam07145
      Location:904 → 919
      PAM2; Ataxin-2 C-terminal region
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    9. XM_021922936.2 → XP_021778628.2  ataxin-2 isoform X6

      UniProtKB/TrEMBL
      A0A096MU68
      Conserved Domains (5) summary
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam09770
      Location:902 → 1158
      PAT1; Topoisomerase II-associated protein PAT1
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    10. XM_021922932.2 → XP_021778624.2  ataxin-2 isoform X2

      UniProtKB/TrEMBL
      A0A096MU68
      Conserved Domains (5) summary
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam09770
      Location:902 → 1176
      PAT1; Topoisomerase II-associated protein PAT1
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    11. XM_021922938.2 → XP_021778630.2  ataxin-2 isoform X8

      UniProtKB/TrEMBL
      A0A096MU68
      Conserved Domains (6) summary
      PHA03247
      Location:923 → 1231
      PHA03247; large tegument protein UL36; Provisional
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam07145
      Location:904 → 919
      PAM2; Ataxin-2 C-terminal region
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    12. XM_021922933.2 → XP_021778625.2  ataxin-2 isoform X3

      UniProtKB/TrEMBL
      A0A096MU68
      Conserved Domains (6) summary
      PHA03247
      Location:923 → 1249
      PHA03247; large tegument protein UL36; Provisional
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam07145
      Location:904 → 919
      PAM2; Ataxin-2 C-terminal region
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    13. XM_021922949.2 → XP_021778641.2  ataxin-2 isoform X19

      Conserved Domains (5) summary
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam09770
      Location:902 → 1160
      PAT1; Topoisomerase II-associated protein PAT1
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    14. XM_021922941.2 → XP_021778633.2  ataxin-2 isoform X12

      UniProtKB/TrEMBL
      A0A2I3N4C8
      Conserved Domains (6) summary
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK07764
      Location:1131 → 1284
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam09770
      Location:902 → 1160
      PAT1; Topoisomerase II-associated protein PAT1
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    15. XM_021922935.2 → XP_021778627.2  ataxin-2 isoform X5

      UniProtKB/TrEMBL
      A0A096MU68
      Conserved Domains (5) summary
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam09770
      Location:902 → 1160
      PAT1; Topoisomerase II-associated protein PAT1
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    16. XM_021922942.2 → XP_021778634.2  ataxin-2 isoform X13

      Conserved Domains (5) summary
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam09770
      Location:902 → 1178
      PAT1; Topoisomerase II-associated protein PAT1
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    17. XM_021922937.2 → XP_021778629.2  ataxin-2 isoform X7

      UniProtKB/TrEMBL
      A0A2I3N4C8
      Related
      ENSPANP00000042730.2, ENSPANT00000045265.2
      Conserved Domains (7) summary
      TIGR01628
      Location:931 → 1073
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam07145
      Location:904 → 919
      PAM2; Ataxin-2 C-terminal region
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam09770
      Location:1025 → 1279
      PAT1; Topoisomerase II-associated protein PAT1
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    18. XM_021922931.2 → XP_021778623.2  ataxin-2 isoform X1

      UniProtKB/TrEMBL
      A0A096MU68
      Conserved Domains (5) summary
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam09770
      Location:902 → 1178
      PAT1; Topoisomerase II-associated protein PAT1
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    19. XM_031650759.1 → XP_031506619.1  ataxin-2 isoform X11

      UniProtKB/TrEMBL
      A0A2I3N4C8, A0A8I5N904
      Related
      ENSPANP00000049686.1, ENSPANT00000075909.1
      Conserved Domains (6) summary
      PHA03247
      Location:923 → 1239
      PHA03247; large tegument protein UL36; Provisional
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam07145
      Location:904 → 919
      PAM2; Ataxin-2 C-terminal region
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain

    20. XM_021922940.2 → XP_021778632.2  ataxin-2 isoform X10

      UniProtKB/TrEMBL
      A0A2I3N4C8
      Conserved Domains (6) summary
      PHA03247
      Location:923 → 1241
      PHA03247; large tegument protein UL36; Provisional
      COG5180
      Location:348 → 493
      PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]
      PRK12323
      Location:562 → 753
      PRK12323; DNA polymerase III subunit gamma/tau
      pfam07145
      Location:904 → 919
      PAM2; Ataxin-2 C-terminal region
      pfam06741
      Location:403 → 464
      LsmAD; LsmAD domain
      pfam14438
      Location:259 → 335
      SM-ATX; Ataxin 2 SM domain
    Nucleotide Protein
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