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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jul 14, 2015 |
| Title |
A DNA Hypomethylation Signature Predicts Novel Anti-Tumor Activity of LSD1 Inhibitors in SCLC |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by array
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| |
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| Overall design |
Refer to individual Series
|
| |
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| Citation(s) |
26175415 |
| Submission date |
Feb 25, 2015 |
| Last update date |
May 15, 2019 |
| Contact name |
David Soong |
| Organization name |
GlaxoSmithKline
|
| Street address |
1250 S Collegeville Rd
|
| City |
Collegeville |
| State/province |
PA |
| ZIP/Postal code |
19426 |
| Country |
USA |
| |
|
| Platforms (3) |
| GPL570 |
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
|
| Samples (136)
|
| GSM1618912 |
SHP-77, 552A for 2 days, rep 2 |
| GSM1618913 |
SHP-77, DMSO for 4 days, rep 1 |
| GSM1618914 |
SHP-77, DMSO for 4 days, rep 2 |
| GSM1618915 |
SHP-77, 552A for 4 days, rep 1 |
| GSM1618916 |
SHP-77, 552A for 4 days, rep 2 |
| GSM1618917 |
SHP-77, DMSO for 7 days, rep 1 |
| GSM1618918 |
NCI-H526, DMSO for 2 days, rep 1 |
| GSM1618919 |
NCI-H526, DMSO for 2 days, rep 2 |
| GSM1618920 |
NCI-H526, 552A for 2 days, rep 1 |
| GSM1618921 |
NCI-H526, 552A for 2 days, rep 2 |
| GSM1618922 |
NCI-H526, 552A for 2 days, rep 3 |
| GSM1618923 |
NCI-H526, DMSO for 4 days, rep 1 |
| GSM1618924 |
NCI-H526, DMSO for 4 days, rep 2 |
| GSM1618925 |
NCI-H526, 552A for 4 days, rep 1 |
| GSM1618926 |
NCI-H526, 552A for 4 days, rep 2 |
| GSM1618927 |
NCI-H526, DMSO for 7 days, rep 1 |
| GSM1618928 |
NCI-H526, DMSO for 7 days, rep 2 |
| GSM1618929 |
NCI-H526, 552A for 7 days, rep 1 |
| GSM1618930 |
NCI-H526, 552A for 7 days, rep 2 |
| GSM1618931 |
NCI-H510, DMSO for 2 days, rep 1 |
| GSM1618932 |
NCI-H510, DMSO for 2 days, rep 2 |
| GSM1618933 |
NCI-H510, 552A for 2 days, rep 1 |
| GSM1618934 |
NCI-H510, 552A for 2 days, rep 2 |
| GSM1618935 |
NCI-H510, DMSO for 4 days, rep 1 |
| GSM1618936 |
NCI-H510, DMSO for 4 days, rep 2 |
| GSM1618937 |
NCI-H510, 552A for 4 days, rep 1 |
| GSM1618938 |
NCI-H510, 552A for 4 days, rep 2 |
| GSM1618939 |
NCI-H510, DMSO for 7 days, rep 1 |
| GSM1618940 |
NCI-H510, DMSO for 7 days, rep 2 |
| GSM1618941 |
NCI-H510, 552A for 7 days, rep 1 |
| GSM1618942 |
NCI-H510, 552A for 7 days, rep 2 |
| GSM1618943 |
COLO668, DMSO for 2 days, rep 1 |
| GSM1618944 |
COLO668, DMSO for 2 days, rep 2 |
| GSM1618945 |
COLO668, 552A for 2 days, rep 1 |
| GSM1618946 |
COLO668, 552A for 2 days, rep 2 |
| GSM1618947 |
COLO668, DMSO for 4 days, rep 1 |
| GSM1618948 |
COLO668, 552A for 4 days, rep 1 |
| GSM1618949 |
COLO668, DMSO for 7 days, rep 1 |
| GSM1618950 |
COLO668, 552A for 7 days, rep 1 |
| GSM1618951 |
COLO668, 552A for 7 days, rep 2 |
| GSM1618952 |
NCI-H146, DMSO for 2 days, rep 1 |
| GSM1618953 |
NCI-H146, 552A for 2 days, rep 1 |
| GSM1618954 |
NCI-H146, 552A for 2 days, rep 2 |
| GSM1618955 |
NCI-H146, DMSO for 4 days, rep 1 |
| GSM1618956 |
NCI-H146, DMSO for 4 days, rep 2 |
| GSM1618957 |
NCI-H146, 552A for 4 days, rep 1 |
| GSM1618958 |
NCI-H146, 552A for 4 days, rep 2 |
| GSM1618959 |
NCI-H146, DMSO for 7 days, rep 1 |
| GSM1618960 |
NCI-H146, DMSO for 7 days, rep 2 |
| GSM1618961 |
NCI-H146, 552A for 7 days, rep 1 |
| GSM1618962 |
NCI-H146, 552A for 7 days, rep 2 |
| GSM1618963 |
NCI-H446, DMSO for 2 days, rep 1 |
| GSM1618964 |
NCI-H446, DMSO for 2 days, rep 2 |
| GSM1618965 |
NCI-H446, 552A for 2 days, rep 1 |
| GSM1618966 |
NCI-H446, 552A for 2 days, rep 2 |
| GSM1618967 |
NCI-H446, DMSO for 4 days, rep 1 |
| GSM1618968 |
NCI-H446, 552A for 4 days, rep 1 |
| GSM1618969 |
NCI-H446, 552A for 4 days, rep 2 |
| GSM1618970 |
NCI-H446, DMSO for 7 days, rep 1 |
| GSM1618971 |
NCI-H446, 552A for 7 days, rep 1 |
| GSM1618972 |
SHP-77, DMSO for 7 days, rep 2 |
| GSM1618973 |
SHP-77, 552A for 7 days, rep 1 |
| GSM1618974 |
SHP-77, 552A for 7 days, rep 2 |
| GSM1618975 |
SHP-77, 552A for 7 days, rep 3 |
| GSM1618976 |
SHP-77, 552A for 7 days, rep 4 |
| GSM1618977 |
COLO668, DMSO for 7 days, rep 2 |
| GSM1618978 |
NCI-H146, DMSO for 2 days, rep 2 |
| GSM1618979 |
NCI-H446, DMSO for 4 days, rep 2 |
| GSM1618980 |
NCI-H446, DMSO for 4 days, rep 3 |
| GSM1618981 |
NCI-H446, DMSO for 7 days, rep 2 |
| GSM1618982 |
NCI-H446, 552A for 7 days, rep 2 |
| GSM1618983 |
COLO668, DMSO for 4 days, rep 2 |
| GSM1618984 |
COLO668, 552A for 4 days, rep 2 |
| GSM1618985 |
H69, DMSO for 4 days, rep 1 |
| GSM1618986 |
H69, DMSO for 4 days, rep 2 |
| GSM1618987 |
H69, 552A for 4 days, rep 1 |
| GSM1618988 |
H69, 552A for 4 days, rep 2 |
| GSM1618989 |
H2171, DMSO for 4 days, rep 1 |
| GSM1618990 |
H2171, DMSO for 4 days, rep 2 |
| GSM1618991 |
H2171, 552A for 4 days, rep 1 |
| GSM1618992 |
H2171, 552A for 4 days, rep 2 |
| GSM1618993 |
H1417, DMSO for 4 days, rep 1 |
| GSM1618994 |
H1417, DMSO for 4 days, rep 2 |
| GSM1618995 |
H1417, 552A for 4 days, rep 1 |
| GSM1618996 |
H1417, 552A for 4 days, rep 2 |
| GSM1618997 |
COLO668 |
| GSM1618998 |
DMS 153 |
| GSM1618999 |
DMS114 |
| GSM1619000 |
DMS53 |
| GSM1619001 |
H1417 |
| GSM1619002 |
H2029 |
| GSM1619003 |
LX101x PDX |
| GSM1619004 |
LX102x PDX |
| GSM1619005 |
LX108x PDX |
| GSM1619006 |
LX110x PDX |
| GSM1619007 |
LX22x PDX |
| GSM1619008 |
LX33x PDX |
| GSM1619009 |
LX36x PDX |
| GSM1619010 |
LX44 PDX |
| GSM1619011 |
LX47x PDX |
| GSM1619012 |
LX48x PDX |
| GSM1619013 |
LX88x PDX |
| GSM1619014 |
NCI-H1048 |
| GSM1619015 |
NCI-H1092 |
| GSM1619016 |
NCI-H187 |
| GSM1619017 |
NCI-H1930 |
| GSM1619018 |
NCI-H2081 |
| GSM1619019 |
NCI-H2171 |
| GSM1619020 |
NCI-H446 |
| GSM1619021 |
NCI-H510 |
| GSM1619022 |
NCI-H524 |
| GSM1619023 |
NCI-H526 |
| GSM1619024 |
NCI-H69 |
| GSM1619025 |
NCI-H82 |
| GSM1619026 |
SCLC3 |
| GSM1619027 |
SHP77 |
| GSM1619029 |
01C patient |
| GSM1619030 |
02C patient |
| GSM1619031 |
03C patient |
| GSM1619032 |
04C patient |
| GSM1619033 |
05C patient |
| GSM1619034 |
06C patient |
| GSM1619035 |
07C patient |
| GSM1619036 |
08C patient |
| GSM1619037 |
09C patient |
| GSM1619038 |
10C patient |
| GSM1619039 |
11C patient |
| GSM1619040 |
1_H526-DMSO_LSD1 |
| GSM1619041 |
2_H526-GSK552_LSD1 |
| GSM1619042 |
3_H526-DMSO_H3K4me2 |
| GSM1619043 |
5_H526-DMSO_H3K4me1 |
| GSM1619044 |
7_H526-DMSO_Input |
| GSM1619045 |
8_H526-GSK552_Input |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE66294 |
A DNA Hypomethylation Signature Predicts Novel Anti-Tumor Activity of LSD1 Inhibitors in SCLC (microarray) |
| GSE66295 |
A DNA Hypomethylation Signature Predicts Novel Anti-Tumor Activity of LSD1 Inhibitors in SCLC (BeadChip) |
| GSE66297 |
A DNA Hypomethylation Signature Predicts Novel Anti-Tumor Activity of LSD1 Inhibitors in SCLC (ChIP-Seq) |
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| Relations |
| BioProject |
PRJNA276451 |
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