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Sample GSM1619002 Query DataSets for GSM1619002
Status Public on Jul 14, 2015
Title H2029
Sample type genomic
 
Source name SCLC cell line
Organism Homo sapiens
Characteristics cell line: H2029
Treatment protocol No treatment
Growth protocol cell lines: RPMI with 10%FBS
Extracted molecule genomic DNA
Extraction protocol All the procedure of bisulfite conversion, amplification, labeling and hybridization was performed following the protocol provided by Illumina
Label Cy5 and Cy3
Label protocol standard Illumina protocol
 
Hybridization protocol standard Illumina protocol
Scan protocol standard Illumina protocol
Data processing Data was processed and normalized using GenomeStudio V2011.1
 
Submission date Feb 25, 2015
Last update date Jul 14, 2015
Contact name David Soong
Organization name GlaxoSmithKline
Street address 1250 S Collegeville Rd
City Collegeville
State/province PA
ZIP/Postal code 19426
Country USA
 
Platform ID GPL13534
Series (2)
GSE66295 A DNA Hypomethylation Signature Predicts Novel Anti-Tumor Activity of LSD1 Inhibitors in SCLC (BeadChip)
GSE66298 A DNA Hypomethylation Signature Predicts Novel Anti-Tumor Activity of LSD1 Inhibitors in SCLC

Data table header descriptions
ID_REF
VALUE Average Beta
H2029.Detection Pval

Data table
ID_REF VALUE H2029.Detection Pval
cg00000029 0.1436716 0
cg00000108 0.8968603 0
cg00000109 0.8890601 0
cg00000165 0.6571828 0
cg00000236 0.8538647 0
cg00000289 0.5623319 0
cg00000292 0.5310202 0
cg00000321 0.5152695 0
cg00000363 0.1450882 0
cg00000622 0.007559506 0
cg00000658 0.7504892 0
cg00000714 0.1919899 0
cg00000721 0.908217 0
cg00000734 0.04924741 0
cg00000769 0.04823039 0
cg00000807 0.8506745 0
cg00000884 0.7632498 0
cg00000905 0.1196507 0
cg00000924 0.4009998 0
cg00000948 0.5356494 0

Total number of rows: 485577

Table truncated, full table size 11002 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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