NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1618933 Query DataSets for GSM1618933
Status Public on Jul 14, 2015
Title NCI-H510, 552A for 2 days, rep 1
Sample type RNA
 
Source name NCI-H510 cells treated with 552A for 2 days
Organism Homo sapiens
Characteristics cell line: NCI-H510
passages: multiple
treatment: 552A for 2 days
Treatment protocol DMSO or 1uM GSK2879552
Growth protocol RPMI, 10% FBS
Extracted molecule total RNA
Extraction protocol Total RNA was extracted, labeled according to standard Affymetrix procedures and hybridized on GeneChip HGU133 Plus 2.0 slides
Label biotin
Label protocol standard Affymetrix protocol
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description Gene expression from NCI-H510 cells treated with 552A for 2 days
Data processing microarray data was processed, normalized, and analyzed using the R Bioconductor package.
 
Submission date Feb 25, 2015
Last update date Jul 14, 2015
Contact name David Soong
Organization name GlaxoSmithKline
Street address 1250 S Collegeville Rd
City Collegeville
State/province PA
ZIP/Postal code 19426
Country USA
 
Platform ID GPL570
Series (2)
GSE66294 A DNA Hypomethylation Signature Predicts Novel Anti-Tumor Activity of LSD1 Inhibitors in SCLC (microarray)
GSE66298 A DNA Hypomethylation Signature Predicts Novel Anti-Tumor Activity of LSD1 Inhibitors in SCLC

Data table header descriptions
ID_REF
VALUE log2 transformed RMA expression valuess

Data table
ID_REF VALUE
1007_s_at 11.7759082
1053_at 10.57807806
117_at 7.508524885
121_at 9.864790765
1255_g_at 4.277324816
1294_at 6.758398889
1316_at 7.064323342
1320_at 5.978572352
1405_i_at 4.619884182
1431_at 5.776937862
1438_at 9.562153536
1487_at 9.640501509
1494_f_at 7.394975077
1552256_a_at 10.0849328
1552257_a_at 10.3604937
1552258_at 6.586204692
1552261_at 7.000891419
1552263_at 6.59147305
1552264_a_at 9.39617434
1552266_at 4.89489511

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM1618933_EA12041_229928_HG-U133_PLUS_2_NCI-H510552A2DAYS.CEL.gz 5.2 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap