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Series GSE58298 Query DataSets for GSE58298
Status Public on Jul 18, 2014
Title Stability of the CpG island methylator phenotype during glioblastoma progression.
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary The Illumina HumanMethylation 450 BeadChip was used on 20 matched pairs of early and late secondary gliomas to assess the changes in DNA methylation during progression.
 
Overall design Bisulphite converted DNA from the 40 samples were hybridised to the Illumina Infinium 450k Human Methylation Beadchip.
 
Contributor(s) Latif F, Hill VK
Citation(s) 25012071
Submission date Jun 08, 2014
Last update date Mar 22, 2019
Contact name Farida Latif
Organization name University of Birmingham
Street address College of Medical and Dental Sciences
City Birmingham
ZIP/Postal code B15 2TT
Country United Kingdom
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (40)
GSM1406146 tumor DNA_pair 1_early lesion
GSM1406147 tumor DNA_pair 1_late lesion
GSM1406148 tumor DNA_pair 2_early lesion
Relations
BioProject PRJNA251945

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE58298_RAW.tar 183.1 Mb (http)(custom) TAR
GSE58298_non_normalized.txt.gz 98.9 Mb (ftp)(http) TXT
Processed data included within Sample table
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