|
| Status |
Public on Jul 18, 2014 |
| Title |
tumor DNA_pair 10_late lesion |
| Sample type |
genomic |
| |
|
| Source name |
tumor DNA_pair 10_late lesion
|
| Organism |
Homo sapiens |
| Characteristics |
tumour stage: secondary glioblastoma grade IV
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA was extracted using QIAmp DNA mini kit 50 (Qiagen) according to manufacturer's instructions
|
| Label |
biotin
|
| Label protocol |
Standard Illumina protocol
|
| |
|
| Hybridization protocol |
Bisulphite converted DNA was amplified, fragmented and hybrdised to Illumina Infinium HumanMethyaltion450 bead chip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using Bead Array Reader using recommended Illumina protocol
|
| Description |
P10.L
|
| Data processing |
Illumina Genome Studio software; non_normalized data matrix contains unmethylated and methylated signal intensities.
|
| |
|
| Submission date |
Jun 08, 2014 |
| Last update date |
Jul 18, 2014 |
| Contact name |
Farida Latif |
| Organization name |
University of Birmingham
|
| Street address |
College of Medical and Dental Sciences
|
| City |
Birmingham |
| ZIP/Postal code |
B15 2TT |
| Country |
United Kingdom |
| |
|
| Platform ID |
GPL13534 |
| Series (1) |
| GSE58298 |
Stability of the CpG island methylator phenotype during glioblastoma progression. |
|
