|
Status |
Public on Jul 18, 2014 |
Title |
tumor DNA_pair 9_late lesion |
Sample type |
genomic |
|
|
Source name |
tumor DNA_pair 9_late lesion
|
Organism |
Homo sapiens |
Characteristics |
tumour stage: secondary glioblastoma grade IV
|
Extracted molecule |
genomic DNA |
Extraction protocol |
DNA was extracted using QIAmp DNA mini kit 50 (Qiagen) according to manufacturer's instructions
|
Label |
biotin
|
Label protocol |
Standard Illumina protocol
|
|
|
Hybridization protocol |
Bisulphite converted DNA was amplified, fragmented and hybrdised to Illumina Infinium HumanMethyaltion450 bead chip using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using Bead Array Reader using recommended Illumina protocol
|
Description |
P9.L
|
Data processing |
Illumina Genome Studio software; non_normalized data matrix contains unmethylated and methylated signal intensities.
|
|
|
Submission date |
Jun 08, 2014 |
Last update date |
Jul 18, 2014 |
Contact name |
Farida Latif |
Organization name |
University of Birmingham
|
Street address |
College of Medical and Dental Sciences
|
City |
Birmingham |
ZIP/Postal code |
B15 2TT |
Country |
United Kingdom |
|
|
Platform ID |
GPL13534 |
Series (1) |
GSE58298 |
Stability of the CpG island methylator phenotype during glioblastoma progression. |
|