|
| Status |
Public on Nov 30, 2014 |
| Title |
Large hypomethylated blocks related to large heterochromatin regions as a universal defining epigenetic alteration in human solid tumors |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by genome tiling array
|
| Summary |
Examined methylation status using HumanMethylation450 BeadChip for samples from 5 different tissue of normal, hyperplastic, adenoma, cancer and metastatic samples.
|
| |
|
| Overall design |
Bisulfite converted DNA from the samples were hybridized to the Illumina Infinium 450k Human Methylation Beadchip.
|
| |
|
| Contributor(s) |
Timp W, Irizarry RI, Feinberg AP |
| Citation(s) |
25191524 |
| Submission date |
Dec 05, 2013 |
| Last update date |
Mar 22, 2019 |
| Contact name |
Winston Timp |
| E-mail(s) |
wtimp@jhu.edu
|
| Phone |
410-417-8467
|
| Organization name |
Johns Hopkins University
|
| Department |
Biomedical Engineering
|
| Lab |
Timp Lab
|
| Street address |
3400 N. Charles St. Clark 102A
|
| City |
Baltimore |
| State/province |
MD |
| ZIP/Postal code |
21218 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
|
| Samples (220)
|
|
| Relations |
| BioProject |
PRJNA230755 |
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