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Series GSE48670 Query DataSets for GSE48670
Status Public on Dec 31, 2013
Title microRNA (miRNA) expression data from induced pluripotent stem cell (iPSC)-derived neurons exposed to VX
Platform organism synthetic construct
Sample organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary Chemical warfare nerve agents (CWNA) are potent cholinesterase inhibitors that may also have non-cholinesterase effects. Several in vivo studies have shown that exposure to CWNA compounds induces damage in the brain and heart.
Underlying mechanisms of this damage are a critical area of research for the development of medical countermeasures.
This study utilized microRNA (miRNA) analysis to evaluate potential direct cellular effects of the nerve agent VX (o-ethyl-s-[2 (diisopropylamino) ethyl] methylphosphonothiolate) on human-induced pluripotent stem cell (iPSC)-derived neurons
 
Overall design iPSC-derived neurons were treated with VX at concentrations of 0µM (saline control), 0.1µM or 100µM for either 1 hour or 6 hours. Total RNA was then isolated and processed for miRNA microarray analysis using Affymetrix miRNA 2.0 GeneChips
 
Contributor(s) Yego EK, Dillman JF, Hoard-Fruchey HM
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Submission date Jul 10, 2013
Last update date May 02, 2017
Contact name E Chepchumba K Yego
E-mail(s) eky1@case.edu
Phone 216-375-7334
Organization name US Army Medical Research Institute of Chemical Defense
Department Research
Street address 3100 Ricketts Point Road
City Aberdeen Proving Ground
State/province MD
ZIP/Postal code 21010
Country USA
 
Platforms (1)
GPL14613 [miRNA-2] Affymetrix Multispecies miRNA-2 Array
Samples (24)
GSM1183188 0µM VX 1hr neuron replicate 1
GSM1183189 0µM VX 1hr neuron replicate 2
GSM1183190 0µM VX 1hr neuron replicate 3
Relations
BioProject PRJNA211002

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Supplementary file Size Download File type/resource
GSE48670_RAW.tar 17.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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