|
| Status |
Public on Oct 10, 2012 |
| Title |
Transcriptomic analysis during heat stress and after the following recovery in grapevine (Vitis vinifera L.) leaves |
| Organism |
Vitis vinifera |
| Experiment type |
Expression profiling by array
|
| Summary |
To elucidate the effect of heat stress and the following recovery on grapevines and identify some regulated genes representing the classical heat stress response and thermotolerance mechanisms, transcript abundance of grapevine (Vitis vinifera L.) were quantified using the Affymetrix Grape Genome oligonucleotide microarray (15,700 transcripts), followed by quantitive Real-Time PCR validation for some transcript profiles. The treatment: heat stress(5h) and the following recovery (18.5h), sampling were conducted at two time respectively. ****[PLEXdb(http://www.plexdb.org) has submitted this series at GEO on behalf of the original contributor, Lijun Wang. The equivalent experiment is VV40 at PLEXdb.]
|
| |
|
| Overall design |
temperature: 45 C(3-replications); temperature: 25 C(3-replications); temperature: 45-25 C(3-replications); temperature: 25-25 C(3-replications)
|
| Web link |
http://www.plexdb.org/modules/PD_browse/experiment_browser.php?experiment=VV40
|
| |
|
| Contributor(s) |
Wang L, Li S |
| Citation(s) |
23016701 |
| Submission date |
Oct 09, 2012 |
| Last update date |
Jun 22, 2017 |
| Contact name |
PLEXdb Curator, Sudhansu Dash |
| Organization name |
Iowa State University
|
| Department |
Virtual Reality Application Center
|
| Lab |
PLEXdb
|
| Street address |
1023 Crop Genomes Informatics Lab (Iowa State University)
|
| City |
Ames |
| State/province |
IA |
| ZIP/Postal code |
50011 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL1320 |
[Vitis_Vinifera] Affymetrix Vitis vinifera (Grape) Genome Array |
|
| Samples (12)
|
|
| Relations |
| BioProject |
PRJNA176926 |
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