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Sample GSM545918 Query DataSets for GSM545918
Status Public on May 22, 2010
Title liver_male_Low feeding level_animal 16
Sample type RNA
 
Source name liver sample at 211 days, male, low
Organism Sus scrofa
Characteristics gender: male
breed: Iberian
tissue: liver
Treatment protocol Liver and fat samples were mantained at -80ºC
Growth protocol Pigs were fed twice daily with the same pelleted diet until feeding restriction treatment
Extracted molecule total RNA
Extraction protocol RiboPure RNA isolation kit
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol, MIAME recommendations
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol GCOS
Description Iberian pig breed
Data processing Bioconductor, GCRMA
 
Submission date May 21, 2010
Last update date May 21, 2010
Contact name Ana I Fernandez
E-mail(s) avila@inia.es
Organization name INIA
Department Mejora Genética Animal
Street address Ctra. Coruña Km 7.5
City Madrid
State/province Madrid
ZIP/Postal code 28040
Country Spain
 
Platform ID GPL3533
Series (1)
GSE21952 Expression data from porcine hepatic and adipose tissue of males and females fed with two feeding levels

Data table header descriptions
ID_REF
VALUE GCRMA

Data table
ID_REF VALUE
AFFX-BioB-3_at 7.731873512
AFFX-BioB-5_at 7.790473938
AFFX-BioB-M_at 8.539393425
AFFX-BioC-3_at 10.04712391
AFFX-BioC-5_at 9.017523766
AFFX-BioDn-3_at 11.94649696
AFFX-BioDn-5_at 11.46941757
AFFX-CreX-3_at 13.99206924
AFFX-CreX-5_at 14.09570026
AFFX-DapX-3_at 9.667119026
AFFX-DapX-5_at 7.714721203
AFFX-DapX-M_at 9.078835487
AFFX-LysX-3_at 6.680072308
AFFX-LysX-5_at 4.051247597
AFFX-LysX-M_at 4.890191555
AFFX-PheX-3_at 5.713172913
AFFX-PheX-5_at 4.014204502
AFFX-PheX-M_at 5.372070313
AFFX-r2-Bs-dap-3_at 10.08917046
AFFX-r2-Bs-dap-5_at 7.867762089

Total number of rows: 24123

Table truncated, full table size 698 Kbytes.




Supplementary file Size Download File type/resource
GSM545918.CEL.gz 1.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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