|
| Status |
Public on Dec 30, 2014 |
| Title |
CD34+/CD1a- 2 |
| Sample type |
genomic |
| |
|
| Source name |
thymus biopsy
|
| Organism |
Homo sapiens |
| Characteristics |
Sex: mixed
age: 1-24 months
cell type: CD34+/CD1a-
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Normal human postnatal thymocytes were isolated by Ficoll-Hypaque centrifugation and magnetic cell sorting from thymus fragments removed during corrective cardiac surgery
|
| Label |
biotin
|
| Label protocol |
Illumina’s Infinium HD Assay Methylation Protocol
|
| |
|
| Hybridization protocol |
Illumina’s Infinium HD Assay Methylation Protocol
|
| Scan protocol |
BeadScan Illumina Inc.
|
| Description |
Bisulfite-converted DNA
|
| Data processing |
Raw data were decoded by GenomeStudio Illumina Inc. And normalization was done (1) forcePositive background correction, (2) log2 transformation, (3) quantile adjusted for color balance and (4) quantile normalization
|
| |
|
| Submission date |
Feb 18, 2014 |
| Last update date |
Dec 30, 2014 |
| Contact name |
Ana Maria Aransay |
| E-mail(s) |
amaransay@cicbiogune.es
|
| Phone |
0034944061325
|
| Organization name |
CIC bioGUNE
|
| Department |
Genome Analysis Platform
|
| Street address |
Parque tecnologico de Bizkaia, Building 801-A
|
| City |
Derio |
| State/province |
BIZKAIA |
| ZIP/Postal code |
48160 |
| Country |
Spain |
| |
|
| Platform ID |
GPL13534 |
| Series (2) |
| GSE55111 |
DNA METHYLATION DURING αβ T CELL DEVELOPMENT IN THE HUMAN THYMUS [methylation] |
| GSE55112 |
DNA METHYLATION DURING αβ T CELL DEVELOPMENT IN THE HUMAN THYMUS |
|
