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Series GSE55111 Query DataSets for GSE55111
Status Public on Dec 30, 2014
Title DNA METHYLATION DURING αβ T CELL DEVELOPMENT IN THE HUMAN THYMUS [methylation]
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Thymocyte differentiation is a complex process which involves well-defined sequential developmental stages that finally result in the generation of mature αβ and γδ T cells. Here, we analyzed DNA methylation and gene expression profiles at successive human thymus developmental stages from early T-cell progenitors to single positive (SP) CD4+ and CD8+ subpopulations
 
Overall design Methylation data sets were generated from two biological replicates per cell type (except CD34+/CD1a+) and each biological replicate was obtained from a pool of 3 individuals each
 
Citation(s) 25539926
Submission date Feb 18, 2014
Last update date Mar 22, 2019
Contact name Ana Maria Aransay
E-mail(s) amaransay@cicbiogune.es
Phone 0034944061325
Organization name CIC bioGUNE
Department Genome Analysis Platform
Street address Parque tecnologico de Bizkaia, Building 801-A
City Derio
State/province BIZKAIA
ZIP/Postal code 48160
Country Spain
 
Platforms (1)
GPL13534 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)
Samples (11)
GSM1329730 CD34+/CD1a- 1
GSM1329731 CD34+/CD1a- 2
GSM1329732 CD34+/CD1a+
This SubSeries is part of SuperSeries:
GSE55112 DNA METHYLATION DURING αβ T CELL DEVELOPMENT IN THE HUMAN THYMUS
Relations
BioProject PRJNA238556

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE55111_GEO_methyl_norm.txt.gz 43.5 Mb (ftp)(http) TXT
GSE55111_RAW.tar 183.1 Mb (http)(custom) TAR
Processed data included within Sample table

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