|
Status |
Public on Aug 22, 2016 |
Title |
normal lung, cryo-preserved (15343) |
Sample type |
genomic |
|
|
Source name |
normal lung, cryo-preserved
|
Organism |
Homo sapiens |
Characteristics |
disease state: control tissue: lung treatment: cryo-preserved
|
Treatment protocol |
na
|
Growth protocol |
na
|
Extracted molecule |
genomic DNA |
Extraction protocol |
genomic DNA was extracted and purified from lung tissue samples using Qiagen QIAmp Kit (Qiagen, Hilden, Germany) according to standard instructions
|
Label |
Cy5 and Cy3
|
Label protocol |
Standard Illumina Protocol
|
|
|
Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridized to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using iScan Reader using standard recommended Illumina scanner setting
|
Description |
15343_NO_FF genomic DNA from normal lung, cryo-preserved
|
Data processing |
BeadStudio software v3.2
|
|
|
Submission date |
Sep 23, 2013 |
Last update date |
Aug 22, 2016 |
Contact name |
Ole Ammerpohl |
Organization name |
UK Ulm
|
Street address |
Albert-Einstein-Allee 11
|
City |
Ulm |
ZIP/Postal code |
89081 |
Country |
Germany |
|
|
Platform ID |
GPL13534 |
Series (1) |
GSE51077 |
The tissue is the issue: Improved methylome analysis from paraffin-embedded tissues by application of the HOPE-technique |
|