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Series GSE62386 Query DataSets for GSE62386
Status Public on Nov 20, 2014
Title In vivo activation of a conserved microRNA program induces robust mammalian heart regeneration (array)
Platform organism synthetic construct
Sample organism Danio rerio
Experiment type Non-coding RNA profiling by array
Summary Heart failure is a leading cause of mortality and morbidity in the developed world, partly because mammals lack the ability to regenerate heart tissue. Whether this is due to evolutionary loss of regenerative mechanisms present in other organisms or to an inability to activate such mechanisms is currently unclear. Here, we decipher mechanisms underlying heart regeneration in adult zebrafish and show that the molecular regulators of this response are conserved in mammals. We identified miR-99/100 and Let-7a/c, and their protein targets smarca5 and fntb, as critical regulators of cardiomyocyte dedifferentiation and heart regeneration in zebrafish. Although human and murine adult cardiomyocytes fail to elicit an endogenous regenerative response following myocardial infarction, we show that in vivo manipulation of this molecular machinery in mice results in cardiomyocyte dedifferentiation and improved heart functionality after injury. These data provide a proof-of-concept for identifying and activating conserved molecular programs to regenerate the damaged heart.
 
Overall design Analysis of miRNA levels in regenerating zebrafish hearts
 
Contributor(s) Aguirre A, Belmonte JC
Citation(s) 25517466
Submission date Oct 15, 2014
Last update date May 02, 2017
Contact name Christopher Benner
E-mail(s) cbenner@ucsd.edu
Organization name University of California, San Diego (UCSD)
Department Medicine
Street address 9500 Gilman Dr. MC 0640
City La Jolla
State/province California
ZIP/Postal code 92093-0640
Country USA
 
Platforms (1)
GPL14613 [miRNA-2] Affymetrix Multispecies miRNA-2 Array
Samples (5)
GSM1526471 amputation1
GSM1526472 amputation2
GSM1526473 amputation3
This SubSeries is part of SuperSeries:
GSE62389 In vivo activation of a conserved microRNA program induces robust mammalian heart regeneration
Relations
BioProject PRJNA263965

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE62386_RAW.tar 2.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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