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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Nov 01, 2014 |
| Title |
Molecular characterization of choroid plexus tumors reveals novel clinically relevant subgroups |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
Genome variation profiling by SNP array
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| Summary |
This SuperSeries is composed of the SubSeries listed below.
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| Overall design |
Refer to individual Series
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| Contributor(s) |
Merino DM, Shlien A, Villani A, Pienkowska M, Mack SC, Ramaswamy V, Shih DJ, Tatevossian R, Novokmet A, Choufani S, Dvir R, Ben-Arush M, Harris BT, Hwang EI, Lulla RR, Pfister SM, Achatz MI, Jabado N, Finlay JL, Weksberg R, Hawkins C, Taylor MD, Tabori U, Ellison DW, Gilbertson RJ, Malkin D |
| Citation(s) |
25336695, 31409384 |
| Submission date |
Aug 28, 2014 |
| Last update date |
Aug 21, 2019 |
| Contact name |
Diana M Merino |
| E-mail(s) |
diana.merino@utoronto.ca
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| Organization name |
The Hospital for Sick Children
|
| Department |
Genetics and Genome Biology
|
| Lab |
Malkin
|
| Street address |
686 Bay St.
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| City |
Toronto |
| State/province |
Ontario |
| ZIP/Postal code |
M5V0A4 |
| Country |
Canada |
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| Platforms (3) |
| GPL5175 |
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [transcript (gene) version] |
| GPL6801 |
[GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array |
| GPL15793 |
Affymetrix OncoScan™ FFPE Express V2 334K |
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| Samples (115)
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| GSM1492950 |
CP107-TA |
| GSM1492951 |
CP108-T |
| GSM1492952 |
CP110-T |
| GSM1492953 |
CP113-T |
| GSM1492954 |
CP114-T |
| GSM1492955 |
CP115-T |
| GSM1492956 |
CP117-T |
| GSM1492957 |
CP118-T |
| GSM1492958 |
CP121-T |
| GSM1492959 |
CP122-TA |
| GSM1492960 |
CP122-TB |
| GSM1492961 |
CP125-T |
| GSM1492962 |
CP127-T |
| GSM1492963 |
CP132-T |
| GSM1492964 |
CP133-T |
| GSM1492965 |
CP136-T |
| GSM1492966 |
CP138-T |
| GSM1492967 |
CP139-TB |
| GSM1492968 |
CP141-TB |
| GSM1492969 |
CP142-TB |
| GSM1492970 |
CP146-T |
| GSM1492971 |
CP148-T |
| GSM1492972 |
CP3-T |
| GSM1492973 |
CP4-T |
| GSM1492974 |
CP41-T |
| GSM1492975 |
CP43-T |
| GSM1492976 |
CP46-T |
| GSM1492977 |
CP47-T |
| GSM1492978 |
CP5-TB |
| GSM1492979 |
CP51-T |
| GSM1492980 |
CP52-T |
| GSM1492981 |
CP55-T |
| GSM1492982 |
CP56-T |
| GSM1492983 |
CP57-T |
| GSM1492984 |
CP58-T |
| GSM1492985 |
CP62-T |
| GSM1492986 |
CP65-T |
| GSM1493229 |
CP1-T |
| GSM1493230 |
CP103-T |
| GSM1493231 |
CP104-T |
| GSM1493232 |
CP106-T |
| GSM1493233 |
CP107-T |
| GSM1493234 |
CP107-TA |
| GSM1493235 |
CP108-T |
| GSM1493236 |
CP109-T |
| GSM1493237 |
CP110-T |
| GSM1493238 |
CP111-T |
| GSM1493239 |
CP112-T |
| GSM1493240 |
CP113-T |
| GSM1493241 |
CP114-T |
| GSM1493242 |
CP115-T |
| GSM1493243 |
CP116-T |
| GSM1493244 |
CP118-T |
| GSM1493245 |
CP119-T |
| GSM1493246 |
CP121-T |
| GSM1493247 |
CP122-TA |
| GSM1493248 |
CP122-TB |
| GSM1493249 |
CP128-T |
| GSM1493250 |
CP132-T |
| GSM1493251 |
CP133-T |
| GSM1493252 |
CP136-T |
| GSM1493253 |
CP137-T |
| GSM1493254 |
CP138-T |
| GSM1493255 |
CP139-TB |
| GSM1493256 |
CP140-TB |
| GSM1493257 |
CP141-TB |
| GSM1493258 |
CP142-TB |
| GSM1493259 |
CP143-TB |
| GSM1493260 |
CP144-TB |
| GSM1493261 |
CP146-T |
| GSM1493262 |
CP148-T |
| GSM1493263 |
CP3-T |
| GSM1493264 |
CP4-T |
| GSM1493265 |
CP41-TA |
| GSM1493266 |
CP43-T |
| GSM1493267 |
CP45-T |
| GSM1493268 |
CP46-T |
| GSM1493269 |
CP47-T |
| GSM1493270 |
CP50-T |
| GSM1493271 |
CP51-T |
| GSM1493272 |
CP52-T |
| GSM1493273 |
CP53-T |
| GSM1493274 |
CP54-T |
| GSM1493275 |
CP55-T |
| GSM1493276 |
CP56-T |
| GSM1493277 |
CP57-T |
| GSM1493278 |
CP59-T |
| GSM1493279 |
CP60-T |
| GSM1493280 |
CP62-T |
| GSM1493281 |
CP63-T |
| GSM1493282 |
CP65-T |
| GSM1493283 |
CP66-T |
| GSM1502992 |
aCPP, CP151-T |
| GSM1502993 |
aCPP, CP159-T |
| GSM1502994 |
CPC, CP10-T |
| GSM1502995 |
CPC, CP147-TA |
| GSM1502996 |
CPC, CP147-TD |
| GSM1502997 |
CPC, CP150-TB |
| GSM1502998 |
CPC, CP153-T |
| GSM1502999 |
CPC, CP157-T |
| GSM1503000 |
CPC, CP158-T |
| GSM1503001 |
CPC, CP2-T |
| GSM1503002 |
CPC, CP22-TA |
| GSM1503003 |
CPC, CP22-TB |
| GSM1503004 |
CPC, CP39-T |
| GSM1503005 |
CPC, CP5-TC |
| GSM1503006 |
CPC, CP58-T |
| GSM1503007 |
CPC, CP6-T |
| GSM1503008 |
CPC, CP64-T |
| GSM1503009 |
CPP, CP120-T |
| GSM1503010 |
CPP, CP125-T |
| GSM1503011 |
CPP, CP152-T |
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| This SuperSeries is composed of the following SubSeries:
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| GSE60892 |
Gene expression analysis of choroid plexus tumors |
| GSE60899 |
Genome-wide copy number and allele-specific copy number analysis of choroid plexus tumors (I) |
| GSE61044 |
Methylation analysis of choroid plexus tumors |
| GSE61363 |
Genome-wide copy number and allele-specific copy number analysis of choroid plexus tumors (II) |
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| Relations |
| BioProject |
PRJNA259766 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE60886_RAW.tar |
2.8 Gb |
(http)(custom) |
TAR (of CEL, TXT) |
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