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| Status |
Public on Feb 13, 2017 |
| Title |
Ethnic specific genetic variation alters smoking associated DNA methylation at HIV co-receptor GPR15 |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by genome tiling array
|
| Summary |
Genome wide DNA methylation profiling of smokers and non-smokers in PBMC samples. The Illumina Infinium 450k Human DNA methylation Beadchip v1.1 was used to obtain DNA methylation profiles across 485,577 CpGs in PBMC samples. Samples included 24 smokers and 28 non-smokers.
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| |
|
| Overall design |
Bisulfite converted DNA from the 52 samples were hybridized to the Illumina Infinium 450k Human Methylation Beadchip v1.1
|
| |
|
| Contributor(s) |
Philibert RA |
| Citation(s) |
26441693 |
| Submission date |
Jul 18, 2014 |
| Last update date |
Mar 22, 2019 |
| Contact name |
Robert A Philibert |
| E-mail(s) |
robert-philibert@uiowa.edu
|
| Phone |
3193534986
|
| Organization name |
University of Iowa
|
| Department |
Psychiatry
|
| Street address |
MEB, 500 Newton Road, Room 2-126D
|
| City |
Iowa City |
| State/province |
Iowa |
| ZIP/Postal code |
52242 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
|
| Samples (52)
|
|
| Relations |
| BioProject |
PRJNA255635 |
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