|
| Status |
Public on Mar 09, 2017 |
| Title |
DNA Methylation Dynamics in Urological Tumors |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by genome tiling array
|
| Summary |
Genome wide DNA methylation profiling of normal and tumoral urological tissues (Prostate, Kidney and Bladder). The Illumina Infinium 450k Human DNA methylation Beadchip was used to obtain DNA methylation profiles across approximately 27,000 CpGs in urological fresh frozzen tissue samples. Samples included morphologically normal samples of each tissue and tumor samples. Kidney: 6 normal and 17 tumor samples; Bladder: 5 normal and 25 tumor samples; Prostate: 5 Normal and 25 tumor samples.
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| |
|
| Overall design |
Bisulphite converted DNA from the 83 samples were hybridised to the Illumina Infinium 450k Human Methylation Beadchip.
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| |
|
| Contributor(s) |
Ramalho-Carvalho J, Esteller M |
| Citation(s) |
28166834, 29599847 |
| Submission date |
Dec 03, 2013 |
| Last update date |
May 22, 2019 |
| Contact name |
Manel Esteller |
| Organization name |
IDIBELL
|
| Department |
PEBC
|
| Lab |
Cancer Epigenetics
|
| Street address |
Hospital Duran i Reynals Av. Gran Via s/n km, 2.7
|
| City |
L'Hospitalet de Llobregat |
| State/province |
Barcelona |
| ZIP/Postal code |
08908 |
| Country |
Spain |
| |
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| Platforms (1) |
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
|
| Samples (83)
|
|
| Relations |
| BioProject |
PRJNA230536 |
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