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| Status |
Public on Nov 21, 2013 |
| Title |
Genome wide methylation profliling of ETMR tumours. |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by genome tiling array
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| Summary |
Genome wide DNA methylation profiling of normal, ETMR and PNET tumours
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| Overall design |
Bisulphite converted DNA from 12 ETMR, 28 PNET and 34 control samples hybridised to the Illumina 450k Human Methylation Beadchip
Please note that three of the 12 EMTR samples are tumor, cell line and xenograft sample derived from a single patient. Thus, there are 10 ETMR patients, 12 samples.
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| Contributor(s) |
Kleinman CL, Gerges N, Papillon-Cavanagh S, Sin-Chan P, Pramatarova A, Quang DK, Adoue V, Busche S, Caron M, Djambazian H, Bemmo A, Fontebasso AM, Spence T, Schwartzentruber J, Albrecht S, Hauser P, Garami M, Klekner A, Bognar L, Montes J, Staffa A, Montpetit A, Berube P, Zakrzewska M, Zakrzewski K, Liberski PP, Dong Z, Siegel PM, Duchaine T, Perotti C, Fleming A, Faury D, Remke M, Gallo M, Dirks P, Taylor MD, Sladek R, Pastinen T, Chan JA, Huang A, Majewski J, Jabado N |
| Citation(s) |
24316981 |
| Submission date |
Nov 20, 2013 |
| Last update date |
Mar 22, 2019 |
| Contact name |
Simon Papillon-Cavanagh |
| Organization name |
McGill University
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| Department |
Human Genetics
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| Lab |
Majewski
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| Street address |
740 Dr Penfield
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| City |
Montrea |
| State/province |
Quebec |
| ZIP/Postal code |
H3A0G1 |
| Country |
Canada |
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| Platforms (1) |
| GPL13534 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482) |
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| Samples (74)
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| Relations |
| BioProject |
PRJNA229379 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE52556_RAW.tar |
929.4 Mb |
(http)(custom) |
TAR (of TXT) |
| GSE52556_non_normalized.txt.gz |
251.3 Mb |
(ftp)(http) |
TXT |
| Processed data included within Sample table |
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