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Series GSE140562 Query DataSets for GSE140562
Status Public on Nov 19, 2019
Title Transcriptome analysis of BPH-resistant and BPH-susceptible rice seedlings in response to BPH infestation
Organism Oryza sativa
Experiment type Expression profiling by array
Summary Transcriptome analysis of BPH-resistant and BPH-susceptible rice seedlings in response to BPH infestation. RH vs. 02428: a microarray analysis of genes that were differentially expressed in a BPH-resistant cultivar, Rathu Heenati (RH) and a susceptible cultivar 02428 after infestation with BPH for 24h. RB vs. SB: a microarray analysis of genes that were differentially expressed in resistant seedling pool and susceptible seedling pool both infested with BPH for 24h. RB vs. RN: a microarray analysis of genes that were differentially expressed in resistant seedling pool infested with BPH for 24h and resistant seedling pool without BPH infestation. Goal was to explore the molecular basis underlying BPH-resistance in rice.
 
Overall design RH vs. 02428: 2 Biological replicates; RB vs. SB: 3 Biological replicates; RB vs. RN: 3 Biological replicates.
 
Contributor(s) Liu Y, He J
Citation(s) 31848246
Submission date Nov 18, 2019
Last update date Feb 19, 2020
Contact name JUN HE
Organization name Nanjing Agricultural University
Street address Weigang 1
City Nanjing
State/province Jiangsu
ZIP/Postal code 210095
Country China
 
Platforms (1)
GPL8852 Agilent-015241 Rice Gene Expression 4x44K Microarray (Probe name version)
Samples (8)
GSM4174171 RH vs. 02428 Replicate 1
GSM4174172 RH vs. 02428 Replicate 2
GSM4174173 RB vs. SB Replicate 1
Relations
BioProject PRJNA590181

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE140562_RAW.tar 114.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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