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Series GSE130956 Query DataSets for GSE130956
Status Public on Apr 30, 2024
Title Investigation of ST8SIA1 expression in icaritin-treated and untreated melanoma cell lines
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We identified that upregulation of ST8SIA1 promotes melanoma brain metastasis.
The goal of this RNA-seq is to analyze the ST8SIA1 expression in icaritin-treated and untreated melanoma cell lines (DP-0574 and WP-0614 cell lines)
In vitro functional studies demonstrate that ST8SIA1 overexpression promotes cell proliferation and colony formation and that this can be halted by icaritin treatment.
 
Overall design mRNA profiles of icaritin-treated or control untreated cells were generated by deep sequencing using Illumina NextSeq 550, in triplicate.
 
Contributor(s) Hoon DS, Ramos RI
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Submission date May 09, 2019
Last update date Apr 30, 2024
Contact name Dave S.B. Hoon
E-mail(s) hoond@jwci.org
Organization name Saint John's Cancer Institute
Department Translational Molecular Medicine
Street address 2200 Santa Monica Boulevard
City Santa Monica
State/province CA
ZIP/Postal code 90403
Country USA
 
Platforms (1)
GPL21697 NextSeq 550 (Homo sapiens)
Samples (12)
GSM3757122 DP-0574 untreated A
GSM3757123 DP-0574 untreated B
GSM3757124 DP-0574 untreated C
Relations
BioProject PRJNA542096
SRA SRP197302

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE130956_RAW.tar 3.3 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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