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ATXN2 ataxin 2 [ Felis catus (domestic cat) ]

Gene ID: 101101418, updated on 8-Mar-2024

Summary

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Official Symbol
ATXN2
Official Full Name
ataxin 2
Primary source
VGNC:VGNC:60037
See related
EnsemblRapid:ENSFCTG00005028989
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: D3
Exon count:
34
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) D3 NC_058379.1 (9272529..9418350, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) D3 NC_018734.3 (9413627..9534624, complement)

Chromosome D3 - NC_058379.1Genomic Context describing neighboring genes Neighboring gene cut like homeobox 2 Neighboring gene uncharacterized LOC123381216 Neighboring gene PH domain containing endocytic trafficking adaptor 1 Neighboring gene SH2B adaptor protein 3 Neighboring gene translation initiation factor IF-2-like Neighboring gene BRCA1 associated protein Neighboring gene acyl-CoA dehydrogenase family member 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in stress granule assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ataxin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058379.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    9272529..9418350 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045041556.1 → XP_044897491.1  ataxin-2 isoform X8

    UniProtKB/TrEMBL
    A0A337S300
    Conserved Domains (2) summary
    PHA03247
    Location:770 → 1088
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:183 → 328
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]

  2. XM_045041551.1 → XP_044897486.1  ataxin-2 isoform X2

    UniProtKB/TrEMBL
    A0A337S300
    Conserved Domains (2) summary
    PHA03247
    Location:770 → 1114
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:183 → 328
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]

  3. XM_045041553.1 → XP_044897488.1  ataxin-2 isoform X4

    UniProtKB/TrEMBL
    A0A337S300
    Related
    ENSFCTP00005056738.1, ENSFCTT00005082112.1
    Conserved Domains (2) summary
    PHA03247
    Location:770 → 1088
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:183 → 328
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]

  4. XM_045041554.1 → XP_044897489.1  ataxin-2 isoform X6

    UniProtKB/TrEMBL
    A0A337S300
    Related
    ENSFCTP00005056850.1, ENSFCTT00005082342.1
    Conserved Domains (2) summary
    PHA03247
    Location:770 → 1088
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:183 → 328
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]

  5. XM_045041557.1 → XP_044897492.1  ataxin-2 isoform X9

    UniProtKB/TrEMBL
    A0A337S300
    Related
    ENSFCTP00005056889.1, ENSFCTT00005082416.1
    Conserved Domains (2) summary
    PHA03247
    Location:758 → 1058
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:183 → 328
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]

  6. XM_045041550.1 → XP_044897485.1  ataxin-2 isoform X1

    UniProtKB/TrEMBL
    A0A337S300
    Conserved Domains (2) summary
    PHA03247
    Location:770 → 1114
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:183 → 328
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]

  7. XM_019814545.3 → XP_019670104.3  ataxin-2 isoform X5

    UniProtKB/TrEMBL
    A0A337S300
    Related
    ENSFCTP00005056473.1, ENSFCTT00005081528.1
    Conserved Domains (2) summary
    PHA03247
    Location:753 → 1095
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:178 → 323
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]

  8. XM_045041552.1 → XP_044897487.1  ataxin-2 isoform X3

    UniProtKB/TrEMBL
    A0A337S300
    Related
    ENSFCTP00005056680.1, ENSFCTT00005081993.1
    Conserved Domains (2) summary
    PHA03247
    Location:753 → 1097
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:178 → 323
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]

  9. XM_045041555.1 → XP_044897490.1  ataxin-2 isoform X7

    UniProtKB/TrEMBL
    A0A337S300
    Related
    ENSFCTP00005056564.1, ENSFCTT00005081741.1
    Conserved Domains (2) summary
    PHA03247
    Location:754 → 1096
    PHA03247; large tegument protein UL36; Provisional
    COG5180
    Location:178 → 323
    PBP1; PAB1-binding protein PBP1, interacts with poly(A)-binding protein [RNA processing and modification]

RNA

  1. XR_006587890.1 RNA Sequence

  2. XR_006587880.1 RNA Sequence

  3. XR_006587889.1 RNA Sequence

  4. XR_006587888.1 RNA Sequence

  5. XR_006587887.1 RNA Sequence

  6. XR_006587879.1 RNA Sequence

  7. XR_006587878.1 RNA Sequence

  8. XR_006587876.1 RNA Sequence

  9. XR_006587875.1 RNA Sequence

  10. XR_006587886.1 RNA Sequence

  11. XR_006587877.1 RNA Sequence

  12. XR_006587891.1 RNA Sequence

  13. XR_006587881.1 RNA Sequence

  14. XR_006587884.1 RNA Sequence

  15. XR_006587882.1 RNA Sequence

  16. XR_006587883.1 RNA Sequence

  17. XR_006587885.1 RNA Sequence

Nucleotide Protein
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