GSE45727[Accession] - GEO DataSets - NCBI

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Items: 20

Select item 2000457271.

NLRP7 promotes trophoblast lineage differentiation, YY1 binding and alters CpG methylation

(Submitter supplied) Genome wide DNA methylation profiling of hESC in the untransduced, scrambled control and with knockdown of NLRP7 in undifferentiated and BMP4 differentiated states using the Illumina HumanMethylation 450 BeadChip. Several genomic sites exhibit altered methylation upon knocking down NLRP7.

Organism:: Homo sapiens

Type:: Methylation profiling by array

Platform:: GPL13534
18 Samples

Download data: TXT

Series

Accession:: GSE45727

ID:: 200045727

Analyze with GEO2R

Select item 1000135342.

Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482)

(Submitter supplied) 1 difference between HumanMethylation450_15017482_v.1.1.bpm and HumanMethylation450_15017482_v.1.2.bpm: 1.1: 41636384,NEGATIVE,-99,Negative 604 1.2: 41636384,RESTORATION,Green,Restore Protocol: See manufacturer's website

Organism:: Homo sapiens

1671 Series
1 Related Platform
117793 Samples

Download data: BPM, CSV, TXT, XLSX

Platform

Accession:: GPL13534

ID:: 100013534

Select item 3011132663.

genomic DNA from differentiated, NLRP7 knockdown H9 hESC, replicate C

Organism:: Homo sapiens

Source name:: differentiated_NLRP7 knockdown H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113266

ID:: 301113266

Select item 3011132654.

genomic DNA from differentiated, scrambled H9 hESC, replicate C

Organism:: Homo sapiens

Source name:: differentiated_scrambled H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113265

ID:: 301113265

Select item 3011132645.

genomic DNA from differentiated, untransduced H9 hESC, replicate C

Organism:: Homo sapiens

Source name:: differentiated_untransduced H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113264

ID:: 301113264

Select item 3011132636.

genomic DNA from undifferentiated, NLRP7 knockdown H9 hESC, replicate C

Organism:: Homo sapiens

Source name:: undifferentiated_NLRP7 knockdown H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113263

ID:: 301113263

Select item 3011132627.

genomic DNA from undifferentiated, scrambled H9 hESC, replicate C

Organism:: Homo sapiens

Source name:: undifferentiated_scrambled H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113262

ID:: 301113262

Select item 3011132618.

genomic DNA from undifferentiated, untransduced H9 hESC, replicate C

Organism:: Homo sapiens

Source name:: undifferentiated_untransduced H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113261

ID:: 301113261

Select item 3011132609.

genomic DNA from differentiated, NLRP7 knockdown H9 hESC, replicate B

Organism:: Homo sapiens

Source name:: differentiated_NLRP7 knockdown H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113260

ID:: 301113260

Select item 30111325910.

genomic DNA from differentiated, scrambled H9 hESC, replicate B

Organism:: Homo sapiens

Source name:: differentiated_scrambled H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113259

ID:: 301113259

Select item 30111325811.

genomic DNA from differentiated, untransduced H9 hESC, replicate B

Organism:: Homo sapiens

Source name:: differentiated_untransduced H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113258

ID:: 301113258

Select item 30111325712.

genomic DNA from undifferentiated, NLRP7 knockdown H9 hESC, replicate B

Organism:: Homo sapiens

Source name:: undifferentiated_NLRP7 knockdown H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113257

ID:: 301113257

Select item 30111325613.

genomic DNA from undifferentiated, scrambled H9 hESC, replicate B

Organism:: Homo sapiens

Source name:: undifferentiated_scrambled H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113256

ID:: 301113256

Select item 30111325514.

genomic DNA from undifferentiated, untransduced H9 hESC, replicate B

Organism:: Homo sapiens

Source name:: undifferentiated_untransduced H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113255

ID:: 301113255

Select item 30111325415.

genomic DNA from differentiated, NLRP7 knockdown H9 hESC, replicate A

Organism:: Homo sapiens

Source name:: differentiated_NLRP7 knockdown H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113254

ID:: 301113254

Select item 30111325316.

genomic DNA from differentiated, scrambled H9 hESC, replicate A

Organism:: Homo sapiens

Source name:: differentiated_scrambled H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113253

ID:: 301113253

Select item 30111325217.

genomic DNA from differentiated, untransduced H9 hESC, replicate A

Organism:: Homo sapiens

Source name:: differentiated_untransduced H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113252

ID:: 301113252

Select item 30111325118.

genomic DNA from undifferentiated, NLRP7 knockdown H9 hESC, replicate A

Organism:: Homo sapiens

Source name:: undifferentiated_NLRP7 knockdown H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113251

ID:: 301113251

Select item 30111325019.

genomic DNA from undifferentiated, scrambled H9 hESC, replicate A

Organism:: Homo sapiens

Source name:: undifferentiated_scrambled H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113250

ID:: 301113250

Select item 30111324920.

genomic DNA from undifferentiated, untransduced H9 hESC, replicate A

Organism:: Homo sapiens

Source name:: undifferentiated_untransduced H9 hESC

Platform:: GPL13534
Series:: GSE45727

Sample

Accession:: GSM1113249

ID:: 301113249

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