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    ATG9A autophagy related 9A [ Nomascus leucogenys (northern white-cheeked gibbon) ]

    Gene ID: 100583196, updated on 8-Mar-2024

    Summary

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    Gene symbol
    ATG9A
    Gene description
    autophagy related 9A
    See related
    EnsemblRapid:ENSNLEG00000009166
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nomascus leucogenys
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
    Orthologs
    human mouse all
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    Genomic context

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    See ATG9A in Genome Data Viewer
    Location:
    chromosome: 22a
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Asia_NLE_v1 (GCF_006542625.1) 22a NC_044402.1 (119896889..119907284, complement)
    102 previous assembly Nleu_3.0 (GCF_000146795.2) 22a NC_019837.1 (110149881..110160430, complement)

    Chromosome 22a - NC_044402.1Genomic Context describing neighboring genes Neighboring gene zinc finger AN1-type containing 2B Neighboring gene ATP binding cassette subfamily B member 6 (LAN blood group) Neighboring gene ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 Neighboring gene galactosidase beta 1 like Neighboring gene serine/threonine kinase 16

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in autophagy of mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in autophagosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    autophagy-related protein 9A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Asia_NLE_v1 Primary Assembly

    Genomic

    1. NC_044402.1 Reference Asia_NLE_v1 Primary Assembly

      Range
      119896889..119907284 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030802404.1 → XP_030658264.1  autophagy-related protein 9A isoform X1

      UniProtKB/TrEMBL
      G1RDA2
      Conserved Domains (2) summary
      pfam04109
      Location:37 → 525
      APG9; Autophagy protein Apg9
      cl41730
      Location:727 → 833
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    2. XM_030802407.1 → XP_030658267.1  autophagy-related protein 9A isoform X2

      UniProtKB/TrEMBL
      G1RDA2
      Conserved Domains (2) summary
      pfam04109
      Location:1 → 464
      APG9; Autophagy protein Apg9
      cl41730
      Location:666 → 772
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    3. XM_030802401.1 → XP_030658261.1  autophagy-related protein 9A isoform X1

      UniProtKB/TrEMBL
      G1RDA2
      Related
      ENSNLEP00000011201.3, ENSNLET00000011754.3
      Conserved Domains (2) summary
      pfam04109
      Location:37 → 525
      APG9; Autophagy protein Apg9
      cl41730
      Location:727 → 833
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    4. XM_030802406.1 → XP_030658266.1  autophagy-related protein 9A isoform X1

      UniProtKB/TrEMBL
      G1RDA2
      Conserved Domains (2) summary
      pfam04109
      Location:37 → 525
      APG9; Autophagy protein Apg9
      cl41730
      Location:727 → 833
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    5. XM_030802402.1 → XP_030658262.1  autophagy-related protein 9A isoform X1

      UniProtKB/TrEMBL
      G1RDA2
      Conserved Domains (2) summary
      pfam04109
      Location:37 → 525
      APG9; Autophagy protein Apg9
      cl41730
      Location:727 → 833
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    6. XM_030802408.1 → XP_030658268.1  autophagy-related protein 9A isoform X2

      UniProtKB/TrEMBL
      G1RDA2
      Conserved Domains (2) summary
      pfam04109
      Location:1 → 464
      APG9; Autophagy protein Apg9
      cl41730
      Location:666 → 772
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins

    7. XM_030802403.1 → XP_030658263.1  autophagy-related protein 9A isoform X1

      UniProtKB/TrEMBL
      G1RDA2
      Conserved Domains (2) summary
      pfam04109
      Location:37 → 525
      APG9; Autophagy protein Apg9
      cl41730
      Location:727 → 833
      KLF9_13_N-like; Kruppel-like factor (KLF) 9, KLF13, KLF14, KLF16, and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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