|
| Status |
Public on Oct 16, 2012 |
| Title |
CTRL_fetal CB_01 |
| Sample type |
genomic |
| |
|
| Source name |
Non-neoplastic fetal brain tissue
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: non-neoplastic brain
brain location: cerebellar
developmental stage: fetus
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Extraction of high molecular weight DNA from frozen tumor samples was carried out by use of a salting-out method or by ultracentrifugation over cesium chloride.
|
| Label |
biotin/DNP
|
| Label protocol |
Illumina protocol.
|
| |
|
| Hybridization protocol |
Illumina protocol.
|
| Scan protocol |
Illumina iScan System according to the manufacturer's protocol.
|
| Description |
control_f1
Methylation data from non-neoplastic brain tissue.
|
| Data processing |
Data analysis has been carried out using GenomeStudio 2011.1 (methylationmodule 1.9.0) and annotation 1.2. The methylation analysis has been performed as suggested by Illumina with no background subtraction and normalization to internal controls.
|
| |
|
| Submission date |
Mar 05, 2012 |
| Last update date |
Oct 16, 2012 |
| Contact name |
Dominik Sturm |
| Organization name |
German Cancer Research Center
|
| Street address |
Im Neuenheimer Feld 280
|
| City |
Heidelberg |
| ZIP/Postal code |
69120 |
| Country |
Germany |
| |
|
| Platform ID |
GPL13534 |
| Series (1) |
| GSE36278 |
Methylation data from glioblastoma tumor samples |
|
