|
| Status |
Public on Mar 27, 2024 |
| Title |
PT-00235411_T_AA |
| Sample type |
genomic |
| |
|
| Source name |
Tumor
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: prostate
tissue region: Tumor
race: AA
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
QIAamp DNA mini Kit
|
| Label |
Cy3, Cy5
|
| Label protocol |
Illumina Infinium HD Methylation
|
| |
|
| Hybridization protocol |
Illumina Infinium HD Methylation
|
| Scan protocol |
Illumina iScan Control Software
|
| Data processing |
Illumina GenomeStudio V1
m450K_Proc_Funnorm.tsv (Normalized Beta values from minfi’s preprocessFunnorm)
m450K_MatrixSignal.tsv (Unmethylated and methylated signal intensities)
|
| |
|
| Submission date |
Mar 26, 2024 |
| Last update date |
Mar 27, 2024 |
| Contact name |
Eduardo Cortes |
| E-mail(s) |
eduardo.cortesgomez@roswellpark.org
|
| Organization name |
ROSWELL PARK CANCER INSTITUTE
|
| Department |
Biostatistics and Bioinformatics
|
| Street address |
ELM AND CARLTON STREETS
|
| City |
BUFFALO |
| State/province |
NY |
| ZIP/Postal code |
14263 |
| Country |
USA |
| |
|
| Platform ID |
GPL13534 |
| Series (1) |
| GSE262522 |
Race-specific coregulatory and transcriptomic profiles associated with DNA methylation and androgen receptor in prostate cancer [m450K] |
|
