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Sample GSM789112 Query DataSets for GSM789112
Status Public on Aug 30, 2013
Title NAFLD liver biopsy tissue 15010
Sample type RNA
 
Source name NAFLD liver biopsy tissue
Organism Homo sapiens
Characteristics Stage: mild (fibrosis stage 0-1)
tissue: liver
Extracted molecule total RNA
Extraction protocol Qiagen Micro Kit according to manufacturer's instructions
Label biotin
Label protocol Ambion MessageAmp Premier as described by the manufacturer
 
Hybridization protocol Affymetrix GeneChip hybridization Oven 645
Scan protocol Affymetrix GeneChip Scanner 7G
Description Gene expression data from mild NAFLD patient
Data processing GC-RMA
 
Submission date Aug 31, 2011
Last update date Aug 30, 2013
Contact name Cynthia Moylan
E-mail(s) cynthia.moylan@duke.edu
Organization name Duke University Medical Center
Department Gastroenterology
Street address 595 LaSalle Street, GSRB1, DUMC 3256
City Durham
State/province NC
ZIP/Postal code 27710
Country USA
 
Platform ID GPL570
Series (2)
GSE31803 Methylome-Transcriptome Relationships in Nonalcoholic Fatty Liver Disease
GSE49541 Expression data for Nonalcoholic fatty liver disease patients

Data table header descriptions
ID_REF
VALUE GC-RMA

Data table
ID_REF VALUE
1007_s_at 4.728
1053_at 5.056
117_at 2.369
121_at 3.069
1255_g_at 2.358
1294_at 2.638
1316_at 2.694
1320_at 2.358
1405_i_at 6.626
1431_at 13.568
1438_at 2.358
1487_at 5.713
1494_f_at 11.757
1552256_a_at 9.837
1552257_a_at 4.963
1552258_at 2.358
1552261_at 2.359
1552263_at 2.939
1552264_a_at 2.743
1552266_at 2.358

Total number of rows: 54675

Table truncated, full table size 899 Kbytes.




Supplementary file Size Download File type/resource
GSM789112.CEL.gz 4.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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