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Sample GSM76586 Query DataSets for GSM76586
Status Public on Sep 30, 2005
Title Breast - 4450
Sample type RNA
 
Source name Breast
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.5
Patient Age: 80-90
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 12
Mammogram: Yes
Number of years in which a mammogram was obtained?: 36-40
Pathological T: 1c
Pathological N: 0(i-)
Pathological Multiple Tumors: No
Pathological Stage During or Following Multimodality Therapy: No
Pathological ER: Positive
Pathological PR: Positive
Pathological HER/2 Neu: Negative
Primary Site: Breast
Histology: Lobular Carcinoma
 
Submission date Sep 30, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1888.2 P 0.000581
AFFX-BioB-M_at 3091.7 P 4.4e-005
AFFX-BioB-3_at 2265 P 8.1e-005
AFFX-BioC-5_at 5775.5 P 4.4e-005
AFFX-BioC-3_at 6712.4 P 4.4e-005
AFFX-BioDn-5_at 13091 P 4.4e-005
AFFX-BioDn-3_at 19055 P 4.4e-005
AFFX-CreX-5_at 58397.8 P 5.2e-005
AFFX-CreX-3_at 69554.7 P 4.4e-005
AFFX-DapX-5_at 2611.4 P 4.4e-005
AFFX-DapX-M_at 4696.7 P 0.000195
AFFX-DapX-3_at 6979.9 P 5.2e-005
AFFX-LysX-5_at 280.2 P 0.002023
AFFX-LysX-M_at 696.3 P 0.000258
AFFX-LysX-3_at 1478.8 P 7e-005
AFFX-PheX-5_at 388.5 P 9.5e-005
AFFX-PheX-M_at 692.5 P 0.000169
AFFX-PheX-3_at 837.1 P 6e-005
AFFX-ThrX-5_at 663.1 P 0.00011
AFFX-ThrX-M_at 1153.7 P 4.4e-005

Total number of rows: 54675

Table truncated, full table size 1456 Kbytes.




Supplementary file Size Download File type/resource
GSM76586.CEL.gz 7.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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