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Sample GSM76579 Query DataSets for GSM76579
Status Public on Sep 30, 2005
Title Renal Pelvis - 38211
Sample type RNA
 
Source name Renal Pelvis
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.2
Patient Age: 50-60
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 16-20
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 56
Pathological T: 3
Pathological N: 1
Pathological M: 0
Pathological Stage: 3
Pathological Grade: 3
Pathological Multiple Tumours: No
Pathological Staged During or Following Multimodality Theraphy: No
Primary Site: Renal Pelvis
Histology: Urothelial (transitional cell) carcinoma
 
Submission date Sep 30, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 2419.1 P 0.000581
AFFX-BioB-M_at 4150 P 4.4e-005
AFFX-BioB-3_at 2594.5 P 9.5e-005
AFFX-BioC-5_at 7772.3 P 4.4e-005
AFFX-BioC-3_at 9084.3 P 4.4e-005
AFFX-BioDn-5_at 15903.2 P 4.4e-005
AFFX-BioDn-3_at 27796 P 4.4e-005
AFFX-CreX-5_at 79208.3 P 5.2e-005
AFFX-CreX-3_at 93145 P 4.4e-005
AFFX-DapX-5_at 4253.7 P 4.4e-005
AFFX-DapX-M_at 6582.1 P 0.000147
AFFX-DapX-3_at 9498.6 P 5.2e-005
AFFX-LysX-5_at 418 P 6e-005
AFFX-LysX-M_at 747.7 P 0.002275
AFFX-LysX-3_at 1930.3 P 4.4e-005
AFFX-PheX-5_at 803.1 P 0.00011
AFFX-PheX-M_at 944.9 P 0.000169
AFFX-PheX-3_at 999.1 P 4.4e-005
AFFX-ThrX-5_at 815.7 P 0.000225
AFFX-ThrX-M_at 1347.8 P 4.4e-005

Total number of rows: 54675

Table truncated, full table size 1457 Kbytes.




Supplementary file Size Download File type/resource
GSM76579.CEL.gz 7.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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