|
Status |
Public on May 14, 2012 |
Title |
Somatic.Primary_HDF51______Female_166.436.1.2 |
Sample type |
genomic |
|
|
Source name |
Somatic.Primary_HDF51______Female_166.436.1.2
|
Organism |
Homo sapiens |
Characteristics |
loring pipeline sample id: 166.436.1.2 loring pipeline stem cell matrix version: stem cell matrix version 342 cell type: Somatic.Primary cell line: HDF51 gender: Female
|
Extracted molecule |
genomic DNA |
Extraction protocol |
genomic DNA was extracted and purified from LBC samples using Qiagen DNeasy Kit according to standard instructions
|
Label |
Cy3, Cy5
|
Label protocol |
Standard Illumina Protocol
|
|
|
Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation27 Beadchip using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
Description |
Illumina_HumanMethylation27k
|
Data processing |
Genome Studio software v2010.3, Normalization method: Average beta values are range scaled.
|
|
|
Submission date |
Jul 13, 2011 |
Last update date |
May 14, 2012 |
Contact name |
Kristopher L. Nazor |
E-mail(s) |
kristopher.nazor@gmail.com
|
Organization name |
The Scripps Research Institute
|
Department |
Regenerative Medicine
|
Lab |
Loring
|
Street address |
10550 North Torrey Pines Road
|
City |
La Jolla |
State/province |
CA |
ZIP/Postal code |
92037 |
Country |
USA |
|
|
Platform ID |
GPL8490 |
Series (2) |
GSE30653 |
Recurrent Variations in DNA Methylation in Human Pluripotent Stem Cells and their Differentiated Derivatives [Illumina Infinium 27K DNA Methylation] |
GSE30654 |
Recurrent Variations in DNA Methylation in Human Pluripotent Stem Cells and their Differentiated Derivatives |
|