|
| Status |
Public on Oct 25, 2012 |
| Title |
90662_08404T2 |
| Sample type |
RNA |
| |
|
| Source name |
08404T2
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: Tumor
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
| |
|
| Hybridization protocol |
Standard Illumina hybridization protocol
|
| Scan protocol |
Standard Illumina scanning protocol
|
| Data processing |
The data were normalized using quantile normalization
|
| |
|
| Submission date |
Jun 15, 2011 |
| Last update date |
Oct 25, 2012 |
| Contact name |
Joanna Dawn Holbrook |
| E-mail(s) |
Joanna_Holbrook@sics.a-star.edu.sg
|
| Organization name |
Singapore Institute of Clinical Sciences
|
| Street address |
30 Medical Drive
|
| City |
Singapore |
| ZIP/Postal code |
117609 |
| Country |
Singapore |
| |
|
| Platform ID |
GPL6947 |
| Series (2) |
| GSE29998 |
Deep sequencing of gastric carcinoma reveals somatic mutations relevant to personalized medicine [Illumina mRNA expression array data] |
| GSE29999 |
Deep sequencing of gastric carcinoma reveals somatic mutations relevant to personalized medicine |
|
