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Sample GSM53188

Query DataSets for GSM53188

Status

Public on Jul 01, 2005

Title

Renal Pelvis - 8286

Sample type

RNA

Source name

Renal Pelvis

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Quality metric = 28S to 18S: 1.5
Patient Age: 70-80
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: Yes
Clinical Question: Stage
Clinical Value: No AJCC Staging Scheme for this Site/Histology
Primary Site: Renal Pelvis
Clinical Question: Histology
Clinical Value: Oncocytoma

Submission date

Jun 30, 2005

Last update date

Aug 28, 2018

Contact name

Erin Curley

E-mail(s)

ecurley@intgen.org

Phone

602-343-8808

Fax

602-343-8440

URL

http://www.intgen.org

Organization name

IGC

Department

Lab

expO

Street address

445 N. 5th Street

City

Phoenix

State/province

ZIP/Postal code

85004

Country

USA

Platform ID

GPL570

Series (1)

GSE2109

Expression Project for Oncology (expO)

Relations

Reanalyzed by

GSE64985

Reanalyzed by

GSE119087

Data table header descriptions
ID_REF	The name of the probe set, blank for control probes
VALUE	The signal value calculated by MAS5, normalized
ABS_CALL	The detection value calculated by the MAS5
DETECTION P-VALUE	The detection p-value calculated by the MAS5

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-BioB-5_at	2372.4	P	0.000662
AFFX-BioB-M_at	2835.5	P	4.4e-005
AFFX-BioB-3_at	1959.8	P	7e-005
AFFX-BioC-5_at	5403	P	5.2e-005
AFFX-BioC-3_at	6533.4	P	4.4e-005
AFFX-BioDn-5_at	14341.3	P	4.4e-005
AFFX-BioDn-3_at	24753.6	P	4.4e-005
AFFX-CreX-5_at	59764.1	P	5.2e-005
AFFX-CreX-3_at	74952.8	P	4.4e-005
AFFX-DapX-5_at	1854.4	P	8.1e-005
AFFX-DapX-M_at	3222.3	P	0.000581
AFFX-DapX-3_at	4516.2	P	6e-005
AFFX-LysX-5_at	199	P	0.001101
AFFX-LysX-M_at	398.4	P	0.012547
AFFX-LysX-3_at	1045.7	P	9.5e-005
AFFX-PheX-5_at	287.6	P	0.000509
AFFX-PheX-M_at	493.5	P	0.006871
AFFX-PheX-3_at	820.9	P	0.000857
AFFX-ThrX-5_at	542.1	P	0.000581
AFFX-ThrX-M_at	776.8	P	7e-005

Total number of rows: 54675

Table truncated, full table size 1452 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM53188.CEL.gz	7.8 Mb	(ftp)(http)	CEL
Processed data included within Sample table