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Sample GSM53182 Query DataSets for GSM53182
Status Public on Jul 01, 2005
Title Renal Pelvis - 5244
Sample type RNA
 
Source name Renal Pelvis
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.5
Patient Age: 50-60
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: Yes
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 10
Pathological T: 3
Pathological N: 2
Pathological M: X
Pathological Stage: 4
Pathological Grade: 3
Pathological Multiple Tumours: Yes
Pathological Staged During or Following Multimodality Theraphy: No
Primary Site: Renal Pelvis
Histology: Urothelial (transitional cell) carcinoma
 
Submission date Jun 30, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1402 P 0.000754
AFFX-BioB-M_at 1634.1 P 0.00011
AFFX-BioB-3_at 1159.6 P 0.000446
AFFX-BioC-5_at 3914.7 P 5.2e-005
AFFX-BioC-3_at 4812.1 P 4.4e-005
AFFX-BioDn-5_at 9129.1 P 4.4e-005
AFFX-BioDn-3_at 14943.7 P 5.2e-005
AFFX-CreX-5_at 38957.7 P 5.2e-005
AFFX-CreX-3_at 44425.6 P 4.4e-005
AFFX-DapX-5_at 600.9 P 0.000195
AFFX-DapX-M_at 1500.7 P 0.000857
AFFX-DapX-3_at 2338.7 P 6e-005
AFFX-LysX-5_at 99.1 P 0.004017
AFFX-LysX-M_at 217.5 M 0.058444
AFFX-LysX-3_at 503.3 P 6e-005
AFFX-PheX-5_at 146.6 P 0.002867
AFFX-PheX-M_at 184.8 P 0.010317
AFFX-PheX-3_at 386 P 0.004017
AFFX-ThrX-5_at 105.3 A 0.227636
AFFX-ThrX-M_at 297.7 P 0.002023

Total number of rows: 54675

Table truncated, full table size 1453 Kbytes.




Supplementary file Size Download File type/resource
GSM53182.CEL.gz 8.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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