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Sample GSM53152 Query DataSets for GSM53152
Status Public on Jul 01, 2005
Title Prostate - 4196
Sample type RNA
 
Source name Prostate
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.4
Patient Age: 50-60
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 16-20
Type of Tobacco Use: Cigarettes
Type of Tobacco Use: Cigars
Type of Tobacco Use: Pipe
Alcohol Consumption?: Yes
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 42
Prior Therapy: Hormonal Treatment
Presenting Symptoms: Dribbling
Presenting Symptoms: Nocturia
PSA: Elevated
# of years PSA Tested?: 0-5
Cancer discovered by digital exam?: No
Current status of disease: Under Therapy
Pathological T: 3b
Pathological N: 0
Pathological M: 0
Pathological Stage: 3
Pathological Grade: 3
Pathological Multiple Tumors: No
Pathological Stage During or Following Multimodality Therapy: Yes
Pathological Gleason Score: 8-10
Primary Site: Prostate
Histology: Adenocarcinoma, NOS
 
Submission date Jun 30, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 3015.1 P 8.1e-005
AFFX-BioB-M_at 4357.7 P 4.4e-005
AFFX-BioB-3_at 2791.9 P 5.2e-005
AFFX-BioC-5_at 8587.5 P 4.4e-005
AFFX-BioC-3_at 10203.8 P 4.4e-005
AFFX-BioDn-5_at 21162.4 P 4.4e-005
AFFX-BioDn-3_at 34813.3 P 4.4e-005
AFFX-CreX-5_at 88712.9 P 5.2e-005
AFFX-CreX-3_at 94883.9 P 4.4e-005
AFFX-DapX-5_at 2617.1 P 4.4e-005
AFFX-DapX-M_at 4035.1 P 0.000509
AFFX-DapX-3_at 6383.5 P 5.2e-005
AFFX-LysX-5_at 369.4 P 6e-005
AFFX-LysX-M_at 619.3 P 0.000857
AFFX-LysX-3_at 897 P 0.000169
AFFX-PheX-5_at 396.6 P 0.000581
AFFX-PheX-M_at 596.4 P 0.00039
AFFX-PheX-3_at 714.7 P 0.000581
AFFX-ThrX-5_at 596.5 P 0.000169
AFFX-ThrX-M_at 1010.6 P 4.4e-005

Total number of rows: 54675

Table truncated, full table size 1455 Kbytes.




Supplementary file Size Download File type/resource
GSM53152.CEL.gz 7.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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