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Sample GSM53073 Query DataSets for GSM53073
Status Public on Jul 01, 2005
Title Colon - 1655
Sample type RNA
 
Source name Colon
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.3
Patient Age: 80-90
Gender: Male
Ethnic Background: African-American
Tobacco Use : Yes
Years of Tobacco Use: 31-35
Type of Tobacco Use: Cigarettes
Type of Tobacco Use: Cigars
Alcohol Consumption?: No
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 14
Diagnosis made by: Colonoscopy
Primary Site: Colon
Histology: Adenocarcinoma
 
Submission date Jun 30, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 1092 P 0.000754
AFFX-BioB-M_at 1456.8 P 0.000297
AFFX-BioB-3_at 710.7 P 0.002275
AFFX-BioC-5_at 3209.5 P 5.2e-005
AFFX-BioC-3_at 4131.4 P 5.2e-005
AFFX-BioDn-5_at 7573.4 P 4.4e-005
AFFX-BioDn-3_at 11553.8 P 5.2e-005
AFFX-CreX-5_at 31069.1 P 5.2e-005
AFFX-CreX-3_at 39786.5 P 4.4e-005
AFFX-DapX-5_at 1128.1 P 0.00011
AFFX-DapX-M_at 2521 P 0.000662
AFFX-DapX-3_at 3363.2 P 9.5e-005
AFFX-LysX-5_at 165.3 P 0.004484
AFFX-LysX-M_at 346.1 M 0.058444
AFFX-LysX-3_at 807.6 P 0.00011
AFFX-PheX-5_at 203.3 P 0.001248
AFFX-PheX-M_at 327.9 P 0.010317
AFFX-PheX-3_at 406.1 M 0.062929
AFFX-ThrX-5_at 325.2 P 0.00762
AFFX-ThrX-M_at 584.9 P 0.000147

Total number of rows: 54675

Table truncated, full table size 1456 Kbytes.




Supplementary file Size Download File type/resource
GSM53073.CEL.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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