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Sample GSM53053

Query DataSets for GSM53053

Status

Public on Jul 01, 2005

Title

Endometrium - 1240

Sample type

RNA

Source name

Endometrium

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Quality metric = 28S to 18S: 1.2
Patient Age: 60-70
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: Yes
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 33
Primary Site: Endometrium
Histology: Endometrioid carcinoma

Submission date

Jun 30, 2005

Last update date

Aug 28, 2018

Contact name

Erin Curley

E-mail(s)

ecurley@intgen.org

Phone

602-343-8808

Fax

602-343-8440

URL

http://www.intgen.org

Organization name

IGC

Department

Lab

expO

Street address

445 N. 5th Street

City

Phoenix

State/province

ZIP/Postal code

85004

Country

USA

Platform ID

GPL570

Series (1)

GSE2109

Expression Project for Oncology (expO)

Relations

Reanalyzed by

GSE64985

Reanalyzed by

GSE119087

Data table header descriptions
ID_REF	The name of the probe set, blank for control probes
VALUE	The signal value calculated by MAS5, normalized
ABS_CALL	The detection value calculated by the MAS5
DETECTION P-VALUE	The detection p-value calculated by the MAS5

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-BioB-5_at	1240.2	P	0.000754
AFFX-BioB-M_at	1941.4	P	6e-005
AFFX-BioB-3_at	1128.8	P	0.000225
AFFX-BioC-5_at	3665.6	P	5.2e-005
AFFX-BioC-3_at	4452.1	P	4.4e-005
AFFX-BioDn-5_at	9354.9	P	4.4e-005
AFFX-BioDn-3_at	14439.3	P	4.4e-005
AFFX-CreX-5_at	37573.8	P	5.2e-005
AFFX-CreX-3_at	44775.2	P	4.4e-005
AFFX-DapX-5_at	2253.1	P	6e-005
AFFX-DapX-M_at	3941.1	P	0.000297
AFFX-DapX-3_at	4864.2	P	5.2e-005
AFFX-LysX-5_at	205.7	P	0.001248
AFFX-LysX-M_at	447.6	P	0.010317
AFFX-LysX-3_at	956.7	P	4.4e-005
AFFX-PheX-5_at	375.3	P	0.00011
AFFX-PheX-M_at	449.1	P	0.001102
AFFX-PheX-3_at	594.9	P	0.002556
AFFX-ThrX-5_at	570.5	P	0.000258
AFFX-ThrX-M_at	771.9	P	4.4e-005

Total number of rows: 54675

Table truncated, full table size 1456 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM53053.CEL.gz	8.4 Mb	(ftp)(http)	CEL
Processed data included within Sample table