|
Status |
Public on Oct 15, 2009 |
Title |
Patient3_newly_healed |
Sample type |
RNA |
|
|
Source name |
Human skin biopsy
|
Organism |
Homo sapiens |
Characteristics |
tissue: skin
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
Label |
biotin
|
Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
|
|
Hybridization protocol |
Standard Illumina hybridization protocol
|
Scan protocol |
Standard Illumina scanning protocol
|
Description |
Patient 3_newly_healed
|
Data processing |
The data were normalised using quantile normalisation with IlluminaGUI in R
|
|
|
Submission date |
Oct 13, 2009 |
Last update date |
Oct 13, 2009 |
Contact name |
Tao Peng |
E-mail(s) |
tpeng@u.washington.edu
|
Phone |
206-667-5861
|
Organization name |
University of Washington
|
Department |
Medicine
|
Street address |
1100 Fairview Ave N/FHCRC/E5-110
|
City |
Seattle |
State/province |
WA |
ZIP/Postal code |
98109 |
Country |
USA |
|
|
Platform ID |
GPL6255 |
Series (1) |
GSE18527 |
Genome-wide analysis of skin biopsies during the mucocutaneous HSV-2 reactivation |
|