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Sample GSM427805 Query DataSets for GSM427805
Status Public on Jul 31, 2010
Title Pollen mother cells 11447_4
Sample type RNA
 
Channel 1
Source name PMC-2
Organism Oryza sativa
Characteristics cell type: pollen mother cells
strain: Nipponbare
Extracted molecule total RNA
Extraction protocol Arcturus Picopure RNA isolation kit
Label Cy3
Label protocol default protocol, available at www.agilent.com
 
Channel 2
Source name Seedling-4
Organism Oryza sativa
Characteristics age: one week-old
developmental stage: seedling
strain: Nipponbare
Extracted molecule total RNA
Extraction protocol Arcturus Picopure RNA isolation kit
Label Cy5
Label protocol default protocol, available at www.agilent.com
 
 
Hybridization protocol default protocol, available at www.agilent.com
Scan protocol default protocol, available at www.agilent.com
Description default protocol, available at www.agilent.com
Data processing Use the Feature Extraction to obtain raw data.
Data was processed by using Genespring
 
Submission date Jul 15, 2009
Last update date Jul 10, 2010
Contact name Weihua Tang
Organization name Shanghai Inst. Plant Phys. & Eco.
Lab Plant-Fungal Interaction & Plant Reproductive Biology
Street address 300 Fenglin Rd
City Shanghai
ZIP/Postal code 200032
Country China
 
Platform ID GPL6864
Series (1)
GSE17098 Tricellular pollen and pollen mother cells (11447)

Data table header descriptions
ID_REF
VALUE log2 of PRE_VALUE: Lowess normalized Cy3/Cy5 signal intensity ratio
PRE_VALUE Lowess normalized Cy3/Cy5 signal intensity ratio

Data table
ID_REF VALUE PRE_VALUE
1 0.3902 1.310549
2 0.0000 1
3 0.0000 1
4 0.0000 1
5 0.0000 1
6 0.0000 1
7 0.0000 1
8 0.0000 1
9 0.0000 1
10 0.0000 1
11 0.0000 1
12 -1.8860 0.270552
13 -0.3351 0.792709
14 -7.2859 0.006408
15 0.0000 1
16 1.5412 2.91039
17 -7.4478 0.005728
18 -0.3032 0.81044
19 -3.8284 0.070394
20 0.0000 1

Total number of rows: 45151

Table truncated, full table size 944 Kbytes.




Supplementary file Size Download File type/resource
GSM427805.txt.gz 14.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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