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Sample GSM38058 Query DataSets for GSM38058
Status Public on Jan 15, 2005
Title Lung - 2479
Sample type RNA
 
Source name Bronchus & Lung
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.4
Patient Age: 50-60
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 31-35
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 39
Workplace or household smokers?: Yes
Pathological T: 2
Pathological N: 0
Pathological M: 0
Pathological Stage: 1B
Pathological Grade: 3
Primary Site: Lung
Histology: Adenocarcinoma, NOS
 
Submission date Dec 23, 2004
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) ecurley@intgen.org
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE60486
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 846.9 P 0.000754
AFFX-BioB-M_at 1142.4 P 0.000044
AFFX-BioB-3_at 481 P 0.000044
AFFX-BioC-5_at 2187.4 P 0.000044
AFFX-BioC-3_at 3046.5 P 0.000044
AFFX-BioDn-5_at 6498.8 P 0.00006
AFFX-BioDn-3_at 9362.7 P 0.000052
AFFX-CreX-5_at 26839.4 P 0.000044
AFFX-CreX-3_at 33479.2 P 0.000044
AFFX-DapX-5_at 1899.3 P 0.000044
AFFX-DapX-M_at 3400.5 P 0.000297
AFFX-DapX-3_at 4611.3 P 0.000052
AFFX-LysX-5_at 267.2 P 0.000127
AFFX-LysX-M_at 297.9 P 0.002867
AFFX-LysX-3_at 647.1 P 0.000044
AFFX-PheX-5_at 291.6 P 0.00006
AFFX-PheX-M_at 518 P 0.000127
AFFX-PheX-3_at 537.6 P 0.00034
AFFX-ThrX-5_at 565.3 P 0.00007
AFFX-ThrX-M_at 742.5 P 0.000044

Total number of rows: 54675

Table truncated, full table size 1447 Kbytes.




Supplementary file Size Download File type/resource
GSM38058.CEL.gz 8.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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