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Sample GSM359400 Query DataSets for GSM359400
Status Public on Jan 20, 2009
Title Kidney_transplanted_CO-treated_4h_donor4
Sample type RNA
 
Source name Kidney, transplanted, treated with CO, 4h
Organism Sus scrofa
Characteristics Tissue: Kidney, Treatment: air, Transplant: yes, Time: 4h, Donor: 4
Extracted molecule total RNA
Extraction protocol Affymetrix recommended procedure
Label biotin
Label protocol Affymetrix recommended procedure
 
Hybridization protocol Affymetrix recommended procedure
Scan protocol Affymetrix recommended procedure
Description MB_05162008_165.CEL
Data processing RMA default procedure:
Bg - Corretion: Exponential-Normal Deconvolution
Normalization: Quantile
Summarization: RMA

software:
GNU R
Bioconductor - package:affy
 
Submission date Jan 12, 2009
Last update date Jan 12, 2009
Contact name Florian Leopold Klinglmueller
E-mail(s) florian.klinglmueller@meduniwien.ac.at
Organization name Medizinische Universitaet Wien
Department Medizinische Statistik und Informatik
Street address Spitalgasse 23
City Vienna
ZIP/Postal code 1090
Country Austria
 
Platform ID GPL3533
Series (1)
GSE14373 Ischemia reperfusion injury (IRI) in organ transplantation and the effects of carbon monoxide treatment

Data table header descriptions
ID_REF
VALUE RMA log2 expression values

Data table
ID_REF VALUE
AFFX-BioB-3_at 6.725294485
AFFX-BioB-5_at 6.661612273
AFFX-BioB-M_at 6.753918604
AFFX-BioC-3_at 8.045845149
AFFX-BioC-5_at 7.500870819
AFFX-BioDn-3_at 9.819281639
AFFX-BioDn-5_at 8.713213117
AFFX-CreX-3_at 11.79229635
AFFX-CreX-5_at 11.29584675
AFFX-DapX-3_at 5.610122681
AFFX-DapX-5_at 4.82484277
AFFX-DapX-M_at 5.775237435
AFFX-LysX-3_at 2.552105166
AFFX-LysX-5_at 1.181967878
AFFX-LysX-M_at 1.550585726
AFFX-PheX-3_at 2.923781988
AFFX-PheX-5_at 1.991190084
AFFX-PheX-M_at 1.749085661
AFFX-r2-Bs-dap-3_at 6.354150687
AFFX-r2-Bs-dap-5_at 5.398607895

Total number of rows: 24123

Table truncated, full table size 698 Kbytes.




Supplementary file Size Download File type/resource
GSM359400.CEL.gz 1.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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