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Sample GSM352417 Query DataSets for GSM352417
Status Public on Jan 01, 2009
Title F-F14 Monarch Butterfly Fall Female 14
Sample type RNA
 
Source name Fall Female
Organism Danaus plexippus
Characteristics dissected brain
Wild caught 10/30/07
Biomaterial provider Carol Cullar, TX
Treatment protocol 2 days Light/Dark cycle
Lights on: 7:09 AM
Lights off: 5:54 PM
Temperature: 20 C
Extracted molecule total RNA
Extraction protocol Extracted using Qiagen RNeasy Mini kit
Amplified using Nugen Ovation kit
Label CY3
Label protocol Nimblegen commercial protocol
 
Hybridization protocol Nimblegen commercial protocol
Scan protocol Nimblegen commercial protocol
Description Nimblegen commercial protocol is located at http://www.nimblegen.com/products/lit/exp_userguide_2008_05_21.pdf
Data processing Nimblegen commercial protocol
 
Submission date Dec 18, 2008
Last update date Dec 23, 2008
Contact name Steven Reppert
E-mail(s) steven.reppert@umassmed.edu
Phone 508-856-6148
Fax 508-856-6266
Organization name University of Massachusetts Medical School
Department Neurobiology
Street address 364 Plantation St
City Worcester
State/province MA
ZIP/Postal code 01605
Country USA
 
Platform ID GPL7829
Series (1)
GSE14041 Defining Behavioral and Molecular Differences Between Summer and Migratory Monarch Butterflies

Data table header descriptions
ID_REF
VALUE Nimblegen normalized value

Data table
ID_REF VALUE
BF01001X1A03_f1P00005 181.1
BF01001X1A03_f1P00084 196.99
BF01001X1A03_f1P00127 76.91
BF01001X1A03_f1P00130 112.51
BF01001X1A03_f1P00136 119.83
BF01001X1A03_f1P00141 97.22
BF01001X1A03_f1P00144 91.63
BF01001X1A04_f1P00205 27.78
BF01001X1A04_f1P00323 14.39
BF01001X1A04_f1P00327 25.37
BF01001X1A04_f1P00329 59.12
BF01001X1A04_f1P00331 26.2
BF01001X1A04_f1P00333 36.39
BF01001X1A04_f1P00422 21.76
BF01001X1A05_f1P00002 1515.65
BF01001X1A05_f1P00071 8804.82
BF01001X1A05_f1P00568 31798.24
BF01001X1A05_f1P00674 24110.71
BF01001X1A05_f1P00684 24122.18
BF01001X1A05_f1P00696 21928.62

Total number of rows: 65788

Table truncated, full table size 2074 Kbytes.




Supplementary file Size Download File type/resource
GSM352417_10604302_532_pair.txt.gz 1.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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