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Sample GSM352411 Query DataSets for GSM352411
Status Public on Jan 01, 2009
Title F-M10 Monarch Butterfly Fall Male 10
Sample type RNA
 
Source name Fall Male
Organism Danaus plexippus
Characteristics dissected brain
Wild caught 10/30/07
Biomaterial provider Carol Cullar, TX
Treatment protocol 2 days Light/Dark cycle
Lights on: 7:09 AM
Lights off: 5:54 PM
Temperature: 20 C
Extracted molecule total RNA
Extraction protocol Extracted using Qiagen RNeasy Mini kit
Amplified using Nugen Ovation kit
Label CY3
Label protocol Nimblegen commercial protocol
 
Hybridization protocol Nimblegen commercial protocol
Scan protocol Nimblegen commercial protocol
Description Nimblegen commercial protocol is located at http://www.nimblegen.com/products/lit/exp_userguide_2008_05_21.pdf
Data processing Nimblegen commercial protocol
 
Submission date Dec 18, 2008
Last update date Dec 23, 2008
Contact name Steven Reppert
E-mail(s) steven.reppert@umassmed.edu
Phone 508-856-6148
Fax 508-856-6266
Organization name University of Massachusetts Medical School
Department Neurobiology
Street address 364 Plantation St
City Worcester
State/province MA
ZIP/Postal code 01605
Country USA
 
Platform ID GPL7829
Series (1)
GSE14041 Defining Behavioral and Molecular Differences Between Summer and Migratory Monarch Butterflies

Data table header descriptions
ID_REF
VALUE Nimblegen normalized value

Data table
ID_REF VALUE
BF01001X1A03_f1P00005 191.71
BF01001X1A03_f1P00084 301.99
BF01001X1A03_f1P00127 85.82
BF01001X1A03_f1P00130 123.56
BF01001X1A03_f1P00136 99.58
BF01001X1A03_f1P00141 59.82
BF01001X1A03_f1P00144 70.74
BF01001X1A04_f1P00205 23.3
BF01001X1A04_f1P00323 27.92
BF01001X1A04_f1P00327 22.08
BF01001X1A04_f1P00329 21.51
BF01001X1A04_f1P00331 20.22
BF01001X1A04_f1P00333 17.39
BF01001X1A04_f1P00422 22.2
BF01001X1A05_f1P00002 1696.74
BF01001X1A05_f1P00071 9036
BF01001X1A05_f1P00568 28075.11
BF01001X1A05_f1P00674 23538.73
BF01001X1A05_f1P00684 23033.09
BF01001X1A05_f1P00696 18882.72

Total number of rows: 65788

Table truncated, full table size 2075 Kbytes.




Supplementary file Size Download File type/resource
GSM352411_10604502_532_pair.txt.gz 1.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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