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Sample GSM352399 Query DataSets for GSM352399
Status Public on Jan 01, 2009
Title S-M03 Monarch Butterfly Summer Male 03
Sample type RNA
 
Source name Summer Male
Organism Danaus plexippus
Characteristics dissected brain
Wild caught 7/30/07
Biomaterial provider Fred Gagnon, MA
Treatment protocol 2 days Light/Dark cycle
Lights on: 5:38 AM
Lights off: 8:09 PM
Temperature: 20 C
Extracted molecule total RNA
Extraction protocol Extracted using Qiagen RNeasy Mini kit
Amplified using Nugen Ovation kit
Label CY3
Label protocol Nimblegen commercial protocol
 
Hybridization protocol Nimblegen commercial protocol
Scan protocol Nimblegen commercial protocol
Description Nimblegen commercial protocol is located at http://www.nimblegen.com/products/lit/exp_userguide_2008_05_21.pdf
Data processing Nimblegen commercial protocol
 
Submission date Dec 18, 2008
Last update date Dec 23, 2008
Contact name Steven Reppert
E-mail(s) steven.reppert@umassmed.edu
Phone 508-856-6148
Fax 508-856-6266
Organization name University of Massachusetts Medical School
Department Neurobiology
Street address 364 Plantation St
City Worcester
State/province MA
ZIP/Postal code 01605
Country USA
 
Platform ID GPL7829
Series (1)
GSE14041 Defining Behavioral and Molecular Differences Between Summer and Migratory Monarch Butterflies

Data table header descriptions
ID_REF
VALUE Nimblegen normalized value

Data table
ID_REF VALUE
BF01001X1A03_f1P00005 241.55
BF01001X1A03_f1P00084 404.55
BF01001X1A03_f1P00127 43.84
BF01001X1A03_f1P00130 60.2
BF01001X1A03_f1P00136 93.75
BF01001X1A03_f1P00141 88.52
BF01001X1A03_f1P00144 48.97
BF01001X1A04_f1P00205 24.05
BF01001X1A04_f1P00323 40.24
BF01001X1A04_f1P00327 72.02
BF01001X1A04_f1P00329 46.57
BF01001X1A04_f1P00331 44.79
BF01001X1A04_f1P00333 22.61
BF01001X1A04_f1P00422 47.54
BF01001X1A05_f1P00002 611.55
BF01001X1A05_f1P00071 10534.24
BF01001X1A05_f1P00568 41892.21
BF01001X1A05_f1P00674 19165.15
BF01001X1A05_f1P00684 29323.26
BF01001X1A05_f1P00696 14481.51

Total number of rows: 65788

Table truncated, full table size 2074 Kbytes.




Supplementary file Size Download File type/resource
GSM352399_10153602_532_pair.txt.gz 1.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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