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Sample GSM2742407 Query DataSets for GSM2742407
Status Public on Aug 14, 2017
Title AD_1
Sample type genomic
 
Source name AD_1
Organism Homo sapiens
Characteristics condition: Alzheimer Disease
gender: Female
health state: Diseased donor
age: 81
Extracted molecule genomic DNA
Extraction protocol Total DNA was isolated by standard procedures
Label Cy3, Cy5
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using High Scan SQ using standard recommended Illumina scanner setting
Data processing Genome Studio V2011.2
 
Submission date Aug 14, 2017
Last update date Aug 14, 2017
Contact name Manel Esteller
Organization name IDIBELL
Department PEBC
Lab Cancer Epigenetics
Street address Hospital Duran i Reynals Av. Gran Via s/n km, 2.7
City L'Hospitalet de Llobregat
State/province Barcelona
ZIP/Postal code 08908
Country Spain
 
Platform ID GPL13534
Series (2)
GSE57360 Genome-scale profiling of the DNA methylation landscape in human neurological disorders (BeadChip)
GSE57361 Genome-scale profiling of the DNA methylation landscape in human neurological disorders

Data table header descriptions
ID_REF
VALUE Average Beta
AD09_2.Detection Pval
AD09_2.Signal_A
AD09_2.Signal_B

Data table
ID_REF VALUE AD09_2.Detection Pval AD09_2.Signal_A AD09_2.Signal_B
cg00000029 0.568789 0.00 2997.959 4086.365
cg00000108 0.9055359 0.00 823.9538 8857.053
cg00000109 0.7703848 0.00 931.2275 3459.884
cg00000165 0.1625716 0.00 4181.394 831.1552
cg00000236 0.8708605 0.00 683.5849 5284.153
cg00000289 0.7142976 0.00 631.0892 1827.829
cg00000292 0.6393579 0.00 4551.146 8245.7
cg00000321 0.5526567 0.00 4312.633 5451.452
cg00000363 0.1752192 0.00 12210.95 2615.38
cg00000622 0.007251496 0.00 19741.79 144.9337
cg00000658 0.8107448 0.00 2252.749 10078.87
cg00000714 0.1549571 0.00 23155.15 4264.342
cg00000721 0.9540502 0.00 196.2882 6151.794
cg00000734 0.06254355 0.00 14919.04 1002.014
cg00000769 0.05421633 0.00 12691.58 733.2675
cg00000807 0.8446943 0.00 2653.314 14975.03
cg00000884 0.9127703 0.00 351.4927 4724.414
cg00000905 0.0755114 0.00 5630.731 468.081
cg00000924 0.4311008 0.00 11496.55 8787.642
cg00000948 0.8990496 0.00 1312.392 12578.56

Total number of rows: 485577

Table truncated, full table size 20794 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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