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Sample GSM2473109 Query DataSets for GSM2473109
Status Public on Aug 13, 2017
Title RT-INI22
Sample type RNA
 
Source name Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: RT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Jan 31, 2017
Last update date Aug 13, 2017
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE94321 Embryonic signature distinguishes pediatric and adult rhabdoid tumors from other SMARCB1-deficient cancers

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 5.244681481
10_at 2.067728115
100_at 6.216688279
1000_at 2.939471045
10000_at 3.657476952
100009676_at 2.30057863
10001_at 8.14614193
10002_at 2.413595271
10003_at 6.533842129
10004_at 2.26856931
100048912_at 2.206841693
100049716_at 3.338726032
10005_at 4.861143237
10006_at 8.273941426
10007_at 8.016605899
10008_at 2.590371409
10009_at 6.454432941
100093630_at 11.64684283
1001_at 2.84621307
10010_at 8.335605752

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM2473109_INI22_s1p1h1_.CEL.gz 7.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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