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Sample GSM238851 Query DataSets for GSM238851
Status Public on Oct 23, 2007
Title SFG_affected_8
Sample type RNA
 
Source name brain, Superior frontal gyrus
Organism Homo sapiens
Characteristics Sample Amount: 10 ng
Bio-Source Name: SFG_affected_8
Organism: Human 
Organ/Tissue Type: brain 
Organ Region: Superior Frontal Gyrus 
Cell Type: pyramidal neuron 
Ethnicity: unknown 
Developmental Stage: Adult 
Disease State: Alzheimer's Disease 
Sex: female 
Genetic Variation: None 
Age: 95 years
Extracted molecule total RNA
Extraction protocol Arcturus PicoPure
Label biotin
Label protocol Affymetrix double-round expression profiling
 
Hybridization protocol Affymetrix's manufacturer's protocol: hybridization onto Affymetrix Human Genome U133 Plus 2.0 array
Scan protocol Affymetrix GCOS
Description arrayconsortium.tgen.org::biosample.458605
cortical layer III neurons
Data processing MAS5.0; target scaling to 150
 
Submission date Oct 19, 2007
Last update date Jun 26, 2019
Contact name Winnie Liang
E-mail(s) wliang@tgen.org
Organization name Translational Genomics
Street address 445 N. Fifth Street
City Phoenix
State/province AZ
ZIP/Postal code 85012
Country USA
 
Platform ID GPL570
Series (1)
GSE5281 Alzheimer's disease and the normal aged brain (steph-affy-human-433773)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087
Reanalyzed by GSE133349

Data table header descriptions
ID_REF
VALUE expression signal
ABS_CALL absent/marginal/present
DETECTION P-VALUE significance of absent/marginal/absent call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 763.666 P 7.00668e-05
AFFX-BioB-M_at 1225.53 P 4.42873e-05
AFFX-BioB-3_at 786.175 P 5.16732e-05
AFFX-BioC-5_at 2418.25 P 4.42873e-05
AFFX-BioC-3_at 2513.1 P 4.42873e-05
AFFX-BioDn-5_at 5801.38 P 4.42873e-05
AFFX-BioDn-3_at 10273.7 P 4.42873e-05
AFFX-CreX-5_at 23261.7 P 5.16732e-05
AFFX-CreX-3_at 28692 P 4.42873e-05
AFFX-DapX-5_at 274.793 P 4.42873e-05
AFFX-DapX-M_at 2202.2 P 5.16732e-05
AFFX-DapX-3_at 12460 P 4.42873e-05
AFFX-LysX-5_at 64.2183 P 0.00359206
AFFX-LysX-M_at 542.521 P 7.00668e-05
AFFX-LysX-3_at 2220.92 P 5.16732e-05
AFFX-PheX-5_at 155.213 P 0.000126798
AFFX-PheX-M_at 739.358 P 4.42873e-05
AFFX-PheX-3_at 1970.22 P 4.42873e-05
AFFX-ThrX-5_at 134.979 P 0.0012475
AFFX-ThrX-M_at 604.818 P 4.42873e-05

Total number of rows: 54675

Table truncated, full table size 1620 Kbytes.




Supplementary file Size Download File type/resource
GSM238851.CEL.gz 4.5 Mb (ftp)(http) CEL
GSM238851.CHP.gz 300.7 Kb (ftp)(http) CHP
Processed data included within Sample table

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