|
| Status |
Public on Jun 20, 2008 |
| Title |
GBM, radiotherapy (15) |
| Sample type |
RNA |
| |
|
| Source name |
brain (resected material)
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: brain (resected material)
disease status: GBM
patient: 15
age: 45.4
gender: FEMALE
treatment: radiotherapy
survival status: 1
survival time in months: 5.62
mgmt status: U
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Qiagen Rneasy Lipid Tissue mini kit protocol
|
| Label |
biotin
|
| Label protocol |
Affymetrix Small sample target labelling assay (double amplification) with ENZO kit, start with 100ng
|
| |
|
| Hybridization protocol |
Affymetrix hybridisation protocol
|
| Scan protocol |
GeneChip Operating Software instructions using GeneChip Scanner 3000 High-Resolution Scanning Patch
|
| Description |
MGMT status: U
|
| Data processing |
RMA: background substruction, quantile normalization and median polish summarization.
|
| |
|
| Submission date |
May 03, 2007 |
| Last update date |
Aug 28, 2018 |
| Contact name |
Monika E Hegi |
| E-mail(s) |
monika.hegi@chuv.ch
|
| Organization name |
CHUV
|
| Department |
Neurosurgery
|
| Lab |
LTBG
|
| Street address |
Bugnon 46
|
| City |
Lausanne |
| State/province |
Vaud |
| ZIP/Postal code |
1011 |
| Country |
Switzerland |
| |
|
| Platform ID |
GPL570 |
| Series (1) |
| GSE7696 |
Glioblastoma from a homogenous cohort of patients treated within clinical trial |
|
| Relations |
| Reanalyzed by |
GSE119087 |
