NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM18486 Query DataSets for GSM18486
Status Public on Mar 24, 2004
Title PGA_PA-S_386
Sample type RNA
 
Source name Left Ventricle Biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description To establish changes in cardiac transcription profiles brought about by heart failure we collected myocardial samples from patients undergoing cardiac transplantation whose failure arises from different etiologies (e.g. idiopathic dilated cardiomyopathy, ischemic cardiomyopathy, alcoholic cardiomyopathy, valvular cardiomyopathy, and hypertrophic cardiomyopathy) and from "normal" organ donors whose hearts cannot be used for transplants. The transcriptional profile of the mRNA in these samples will be measured with gene array technology. Changes in transcriptional profiles can be correlated with the physiologic profile of heart-failure hearts acquired at the time of transplantation.http://cardiogenomics.med.harvard.edu/project-detail?project_id=229
Keywords = human, idiopathic, ischemic, cardiac, hypertrophy
 
Submission date Mar 10, 2004
Last update date Aug 28, 2018
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL570
Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 468.1 P 0.001248
AFFX-BioB-M_at 714.4 P 0.000857
AFFX-BioB-3_at 302.1 P 0.004484
AFFX-BioC-5_at 978.6 P 0.000225
AFFX-BioC-3_at 863.3 P 0.000044
AFFX-BioDn-5_at 1395.3 P 0.00006
AFFX-BioDn-3_at 7339.2 P 0.000297
AFFX-CreX-5_at 11212.6 P 0.000052
AFFX-CreX-3_at 13472.4 P 0.000044
AFFX-DapX-5_at 34.3 A 0.156732
AFFX-DapX-M_at 15.4 A 0.559354
AFFX-DapX-3_at 3.9 A 0.949771
AFFX-LysX-5_at 21.6 A 0.156732
AFFX-LysX-M_at 29.7 A 0.574038
AFFX-LysX-3_at 19.9 A 0.227636
AFFX-PheX-5_at 4.6 A 0.860518
AFFX-PheX-M_at 6.2 A 0.804734
AFFX-PheX-3_at 18.9 A 0.814869
AFFX-ThrX-5_at 32.6 A 0.52976
AFFX-ThrX-M_at 8.3 A 0.631562

Total number of rows: 54675

Table truncated, full table size 1451 Kbytes.




Supplementary file Size Download File type/resource
GSM18486_PA-S_386.cel.gz 8.8 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap