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Sample GSM18484 Query DataSets for GSM18484
Status Public on Mar 24, 2004
Title PGA_PA-S_314
Sample type RNA
 
Source name Left Ventricle Biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description To establish changes in cardiac transcription profiles brought about by heart failure we collected myocardial samples from patients undergoing cardiac transplantation whose failure arises from different etiologies (e.g. idiopathic dilated cardiomyopathy, ischemic cardiomyopathy, alcoholic cardiomyopathy, valvular cardiomyopathy, and hypertrophic cardiomyopathy) and from "normal" organ donors whose hearts cannot be used for transplants. The transcriptional profile of the mRNA in these samples will be measured with gene array technology. Changes in transcriptional profiles can be correlated with the physiologic profile of heart-failure hearts acquired at the time of transplantation.http://cardiogenomics.med.harvard.edu/project-detail?project_id=229
Keywords = human, idiopathic, ischemic, cardiac, hypertrophy
 
Submission date Mar 10, 2004
Last update date Aug 28, 2018
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL570
Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 321.2 P 0.002275
AFFX-BioB-M_at 316.1 P 0.002556
AFFX-BioB-3_at 193.7 P 0.020022
AFFX-BioC-5_at 770.3 P 0.001102
AFFX-BioC-3_at 664.8 P 0.000052
AFFX-BioDn-5_at 916.7 P 0.00011
AFFX-BioDn-3_at 6981.6 P 0.000446
AFFX-CreX-5_at 8740.9 P 0.000044
AFFX-CreX-3_at 10493.2 P 0.000044
AFFX-DapX-5_at 62.3 A 0.078002
AFFX-DapX-M_at 46.7 A 0.327079
AFFX-DapX-3_at 9.2 A 0.910522
AFFX-LysX-5_at 33.6 A 0.227636
AFFX-LysX-M_at 58.7 A 0.39692
AFFX-LysX-3_at 15.2 A 0.48511
AFFX-PheX-5_at 35.1 A 0.470241
AFFX-PheX-M_at 12.3 A 0.824756
AFFX-PheX-3_at 34.7 A 0.631562
AFFX-ThrX-5_at 26.9 A 0.659339
AFFX-ThrX-M_at 50.1 A 0.275146

Total number of rows: 54675

Table truncated, full table size 1451 Kbytes.




Supplementary file Size Download File type/resource
GSM18484_PA-S_314.cel.gz 9.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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